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B1Z2H7 (B1Z2H7_BURA4) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Malate synthase G HAMAP MF_00641 RuleBase RU003572
EC=2.3.3.9 HAMAP MF_00641 RuleBase RU003572
Gene names
Name:glcB HAMAP MF_00641
Ordered Locus Names:BamMC406_5495
OrganismBurkholderia ambifaria (strain MC40-6) [Complete proteome] [HAMAP]
Taxonomic identifier398577 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length724 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Acetyl-CoA + H2O + glyoxylate = (S)-malate + CoA. HAMAP MF_00641 RuleBase RU003572 SAAS SAAS006253

Pathway

Carbohydrate metabolism; glyoxylate cycle; (S)-malate from isocitrate: step 2/2. HAMAP MF_00641 RuleBase RU003572 SAAS SAAS006253

Subunit structure

Monomer By similarity. HAMAP MF_00641 SAAS SAAS006253

Subcellular location

Cytoplasm By similarity HAMAP MF_00641 RuleBase RU003572.

Sequence similarities

Belongs to the malate synthase family. GlcB subfamily. HAMAP MF_00641 RuleBase RU003572

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site3361Proton acceptor By similarity HAMAP MF_00641
Active site6291Proton donor By similarity HAMAP MF_00641

Sequences

Sequence LengthMass (Da)Tools
B1Z2H7 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 2B2BE6BDF355889D

FASTA72478,535
        10         20         30         40         50         60 
MIDQAGLQVA PALSQFIENE ALPGTGIDKA AFWSGFSALV HDLAPRNREL LAERDRLQHE 

        70         80         90        100        110        120 
LDTWHRAHPG PVRDHAAFRA FLEQIGYLVP VPSNVAAATA NVDSEIATQA GPQLVVPLSN 

       130        140        150        160        170        180 
ARYALNAANA RWGSLYDALY GTDALPEDGG AERTSTYNPT RGQRVIDYAR NVLDNAAPLT 

       190        200        210        220        230        240 
SGSHRDALRY RVEDGQLAVE TGKGVVHLAR PAQFVGYQGA AGAPSAILLK NNGLHIEIQI 

       250        260        270        280        290        300 
DASTPIGRAD LANVKDVVLE AAVSTIIDCE DSVAAVDAED KVQLYRNWLG LMQGTLVEEV 

       310        320        330        340        350        360 
AKGGKTFTRR LNADREYTTP AGGTLSLHGR SLLFVRNVGH LMTNGAVLDR DGNEIPEGIL 

       370        380        390        400        410        420 
DGVVTTLCAL HDLKAKRNSR TGSIYIVKPK MHGPVEVAFA DTLFARIEDL YGLPRNTLKM 

       430        440        450        460        470        480 
GIMDEERRTS VNLAACIAAA AARVAFINTG FLDRTGDEMH TAMEAGPMIR KGEMKSSAWI 

       490        500        510        520        530        540 
TAYERNNVLA GLSAGLRGRA QIGKGMWAMP DLMHAMLEQK IAHPRAGANT AWVPSPTAAT 

       550        560        570        580        590        600 
LHALHYHQVD VQAVQQQLEK TSYASERDAL LEGLLTVPVV ERAAWSESEI LSEVENNAQG 

       610        620        630        640        650        660 
ILGYVVRWVE QGVGCSKVPD IHDVGLMEDR ATLRISSQHI ANWLRHGVIT EAFVLDVFKR 

       670        680        690        700        710        720 
MARVVDQQNA GDPNYRPMAP GYDQSTAFKA ACALALQGTS QPSGYTEPLL HRFRLAFKAQ 


QQGA

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References

[1]"Complete sequence of chromosome 2 of Burkholderia ambifaria MC40-6."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A. expand/collapse author list , Ramette A., Konstantinidis K., Tiedje J., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001026 Genomic DNA. Translation: ACB67939.1.
RefSeqYP_001812155.1. NC_010552.1.

3D structure databases

ProteinModelPortalB1Z2H7.
SMRB1Z2H7. Positions 2-715.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1Z2H7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6179868.
GenomeReviewsGene locus BamMC406_5495 in contig CP001026_GR.
KEGGbac:BamMC406_5495.
PATRIC19040851. VBIBurAmb82852_5707.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG350005.
OMAENANWSV.
ProtClustDBPRK02999.

Family and domain databases

HAMAPMF_00641. Malate_synth_G.
[Tree]
InterProIPR011076. Malate_synth-like.
IPR023310. Malate_synth_G_beta_sub_dom.
IPR001465. Malate_synthase.
IPR006253. Malate_synthG.
[Graphical view]
Gene3DG3DSA:2.170.170.11. Malate_synth_G_beta_sub_dom. 2 hits.
KOK01638.
PANTHERPTHR21631:SF1. Malate_synthase. 1 hit.
PfamPF01274. Malate_synthase. 1 hit.
[Graphical view]
SUPFAMSSF51645. Malat_synth_like. 1 hit.
TIGRFAMsTIGR01345. Malate_syn_G. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1Z2H7_BURA4
AccessionPrimary (citable) accession number: B1Z2H7
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info