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B1Z247 (B1Z247_BURA4) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BamMC406_3915 EMBL ACB66381.1
OrganismBurkholderia ambifaria (strain MC40-6) [Complete proteome] [HAMAP] EMBL ACB66381.1
Taxonomic identifier398577 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex

Protein attributes

Sequence length462 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtransmembrane transport

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functiontransporter activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1Z247 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 8FC4098A4792AFA8

FASTA46247,629
        10         20         30         40         50         60 
MQPASPARSA AHGAADADPS HDLVYGPNDR PAPMVAFVAA LQHLLAIIVP IVTPGLLICQ 

        70         80         90        100        110        120 
ALGVSSRDTT LIVSMSLVIS GIATFVQCKR FGPLGAGLLI VQGTSFNFVG PLIAGGSVMV 

       130        140        150        160        170        180 
KQGTPVETVM AAIFGVVIAG SFVEMAVSRI LPFVKRLITP LVTGIVVLLI GLTLIKVGLI 

       190        200        210        220        230        240 
SMGGGYGAMA NGTFASAQNL TLSCVVLGTI ILLNRVPIVW VRSTALVIAL VIGYAAAAVL 

       250        260        270        280        290        300 
GRLDFTGVHQ AALFQVPTPL HFGIGFSWSL FVPMLIIYLV TSLEAIGDVT ATSKISKEPV 

       310        320        330        340        350        360 
EGPVWMRRIK GGVLVNGANS LLAGVFNTFP SSVFAQNNGV IQITGVASRH VGIWIAGMLV 

       370        380        390        400        410        420 
VLGLFPVVAG ALQAVPEPVL GGAAMVMFGA VAASGINILS GIHLDRRALL IIAVSLALGL 

       430        440        450        460 
GVSQVPDILN SLPHALKNVL ESGVATGGIC ALVMNWFLPE QK 

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References

[1]"Complete sequence of chromosome 2 of Burkholderia ambifaria MC40-6."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A. expand/collapse author list , Ramette A., Konstantinidis K., Tiedje J., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MC40-6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001026 Genomic DNA. Translation: ACB66381.1.
RefSeqYP_001810597.1. NC_010552.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING398577.BamMC406_3915.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB66381; ACB66381; BamMC406_3915.
GeneID6180831.
KEGGbac:BamMC406_3915.
PATRIC19037481. VBIBurAmb82852_4030.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2233.
HOGENOMHOG000038198.
KOK16345.
OMANSMLSAV.
ProtClustDBCLSK865798.

Enzyme and pathway databases

BioCycBAMB398577:GH38-2092-MONOMER.

Family and domain databases

InterProIPR017588. Xan_permease.
IPR006042. Xan_ur_permease.
IPR006043. Xant/urac/vitC.
[Graphical view]
PANTHERPTHR11119. PTHR11119. 1 hit.
PfamPF00860. Xan_ur_permease. 1 hit.
[Graphical view]
TIGRFAMsTIGR00801. ncs2. 1 hit.
TIGR03173. pbuX. 1 hit.
PROSITEPS01116. XANTH_URACIL_PERMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1Z247_BURA4
AccessionPrimary (citable) accession number: B1Z247
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)