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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

BamMC406_5257

Organism
Burkholderia ambifaria (strain MC40-6)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciBAMB398577:GH38-5340-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:BamMC406_5257Imported
OrganismiBurkholderia ambifaria (strain MC40-6)Imported
Taxonomic identifieri398577 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000001680 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi398577.BamMC406_5257.

Structurei

3D structure databases

ProteinModelPortaliB1Z1A0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiPMYAINI.
OrthoDBiEOG62K1SK.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

B1Z1A0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVEIPHRRSE FTARYFVESS VPIAKAAEVI AGEQSSGTFL ALPGETDALK
60 70 80 90 100
NRARARVVKV DSHSPVLEPS LYSAHVERKG SPSVYFRGEI EIAFPVDNIG
110 120 130 140 150
PNLPTLLSTV AGNLFELGEV TGLRLLDIDL PATYAAQFPG PQFGISGTRD
160 170 180 190 200
FAKVYDRPMI GTIIKPSIGL LPAQTAEIVD SLCAADIDFI KDDELLADPT
210 220 230 240 250
YASFDERLAA VMPVLHRHAD RMGRMPMYAI NISGTIDEML QRHDAVVRAG
260 270 280 290 300
GTCVMICINW VGFAGVEHLR KHAQLPIHGH RNGWGALTRY PQLGFSFKAY
310 320 330 340 350
QKLWRLAGVD QLHVNGIRSK FWEPDASVIE SARACLTPFA GVQPLMPVFS
360 370 380 390 400
SGQWASQAPD LYAQLGSVDL MHLAGGGIIG HPHGIAAGVA SMREGWEAAV
410 420
EGIDLNTFAE SRPALRAALS HFQSA
Length:425
Mass (Da):46,100
Last modified:May 20, 2008 - v1
Checksum:iE225D653937BC76F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001026 Genomic DNA. Translation: ACB67702.1.
RefSeqiYP_001811918.1. NC_010552.1.

Genome annotation databases

EnsemblBacteriaiACB67702; ACB67702; BamMC406_5257.
KEGGibac:BamMC406_5257.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001026 Genomic DNA. Translation: ACB67702.1.
RefSeqiYP_001811918.1. NC_010552.1.

3D structure databases

ProteinModelPortaliB1Z1A0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi398577.BamMC406_5257.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB67702; ACB67702; BamMC406_5257.
KEGGibac:BamMC406_5257.

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiPMYAINI.
OrthoDBiEOG62K1SK.

Enzyme and pathway databases

BioCyciBAMB398577:GH38-5340-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 2 of Burkholderia ambifaria MC40-6."
    Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A.
    , Ramette A., Konstantinidis K., Tiedje J., Richardson P.
    Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MC40-6Imported.

Entry informationi

Entry nameiB1Z1A0_BURA4
AccessioniPrimary (citable) accession number: B1Z1A0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: April 1, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.