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B1Z181 (SELD_BURA4) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Selenide, water dikinase
EC=2.7.9.3
Alternative name(s):
Selenium donor protein
Selenophosphate synthase
Gene names
Name:selD
Ordered Locus Names:BamMC406_5238
OrganismBurkholderia ambifaria (strain MC40-6) [Complete proteome] [HAMAP]
Taxonomic identifier398577 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length354 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes selenophosphate from selenide and ATP By similarity. HAMAP MF_00625

Catalytic activity

ATP + selenide + H2O = AMP + selenophosphate + phosphate. HAMAP MF_00625

Cofactor

Magnesium By similarity. HAMAP MF_00625

Sequence similarities

Belongs to the selenophosphate synthase 1 family. Class I subfamily.

Ontologies

Keywords
   LigandATP-binding
Magnesium
Nucleotide-binding
Selenium
   Molecular functionKinase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

selenide, water dikinase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 354354Selenide, water dikinase HAMAP MF_00625
PRO_1000130515

Regions

Nucleotide binding236 – 2427ATP Potential

Sites

Active site231 Potential
Site261Important for catalytic activity By similarity

Sequences

Sequence LengthMass (Da)Tools
B1Z181 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: CAA6647879B3C427

FASTA35436,138
        10         20         30         40         50         60 
MTEATLTPPA VPRLTSLSHG GGCGCKIAPG VLSELLKRAT PPALFPDLLV GTETSDDAAV 

        70         80         90        100        110        120 
YRLNDEQAIV ATTDFFMPIV DDPFDFGRIA ATNALSDVYA MGGKPILALA LVGMPINVLP 

       130        140        150        160        170        180 
HETIAAILRG GESVCAEAGI PVAGGHSIDS VEPIYGLAAI GVVHPSRVKR NAAARAGDVL 

       190        200        210        220        230        240 
VLGKPLGVGV LSAALKKNQL DAAGYAQMVA TTTKLNRPGA ELAALPGVHA LTDVTGFGLL 

       250        260        270        280        290        300 
GHTLELARGA NLTARVHYAS LPWLAGVEAF VADGVFTGAS GRNWAAYGTD VRLADGLPPV 

       310        320        330        340        350 
AQALLTDPQT SGGLLVACAP EAVDDVLACF RADGFDRAAV IGEMVDGPSR VDVA

« Hide

References

[1]"Complete sequence of chromosome 2 of Burkholderia ambifaria MC40-6."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A. expand/collapse author list , Ramette A., Konstantinidis K., Tiedje J., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MC40-6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001026 Genomic DNA. Translation: ACB67683.1.
RefSeqYP_001811899.1. NC_010552.1.

3D structure databases

ProteinModelPortalB1Z181.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1Z181.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6180775.
GenomeReviewsGene locus BamMC406_5238 in contig CP001026_GR.
KEGGbac:BamMC406_5238.
PATRIC19040331. VBIBurAmb82852_5447.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG383791.
OMADYIAQGC.
ProtClustDBPRK00943.

Enzyme and pathway databases

BioCycBAMB398577:BAMMC406_5238-MONOMER.

Family and domain databases

HAMAPMF_00625. SelD.
[Tree]
InterProIPR000728. AIR_synth.
IPR010918. AIR_synth_C.
IPR016188. PurM_N-like.
IPR004536. SelD.
IPR023061. SelD_I.
[Graphical view]
KOK01008.
PfamPF00586. AIRS. 1 hit.
PF02769. AIRS_C. 1 hit.
[Graphical view]
PIRSFPIRSF036407. Selenphspht_syn. 1 hit.
SUPFAMSSF56042. AIR_synth_C. 1 hit.
SSF55326. PurM_N-like. 1 hit.
TIGRFAMsTIGR00476. SelD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameSELD_BURA4
AccessionPrimary (citable) accession number: B1Z181
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: May 20, 2008
Last modified: January 25, 2012
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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