B1Z0F4 (B1Z0F4_BURA4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Polar amino acid ABC transporter, inner membrane subunit EMBL ACB66075.1

Gene names

Ordered Locus Names:

BamMC406_3608 EMBL ACB66075.1

Organism

Burkholderia ambifaria (strain MC40-6) [Complete proteome] [HAMAP] EMBL ACB66075.1

Taxonomic identifier

398577 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex › Burkholderia ambifaria

Protein attributes

Sequence length	237 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Membrane; Multi-pass membrane protein By similarity RuleBase RU000478.
Sequence similarities	Belongs to the binding-protein-dependent transport system permease family. RuleBase RU000478 Contains 1 ABC transmembrane type-1 domain. SAAS SAAS000515

Ontologies

Keywords
Biological process	Transport RuleBase RU000478 SAAS SAAS000515
Cellular component	Cell membrane SAAS SAAS000515 Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS000515
Technical term	Complete proteome
Gene Ontology (GO)
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1Z0F4 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 28B094A10FCB2FC2	FASTA	237	26,715
	10 20 30 40 50 60 MIELIGQYWQ NYLYTDGYRF SGLAITLWLL VVSIAFGFAL AVPLAIARAS SNRWISGPVW 70 80 90 100 110 120 LYTYVFRGTP LYVQLLMCYT GIYSLQVVHD HVLLDTFFRN AMNCTLLAFV LNECAYATEI 130 140 150 160 170 180 FAGAIKATSA GEIEAGMAYG MSRFKLYTRI ILPSALRRSL PSYSNEVILM LHATTLAFTA 190 200 210 220 230 TVPDILKVTR DVNSATYMSF QAYGIAAVLY AIVVFTLIWA FRKLETRWLA YLSPRGH

References

[1]

"Complete sequence of chromosome 2 of Burkholderia ambifaria MC40-6." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A. , Ramette A., Konstantinidis K., Tiedje J., Richardson P. Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MC40-6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001026 Genomic DNA. Translation: ACB66075.1.
RefSeq	YP_001810291.1. NC_010552.1.
3D structure databases
ProteinModelPortal	B1Z0F4.
ModBase	Search...
Protein-protein interaction databases
STRING	398577.BamMC406_3608.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACB66075; ACB66075; BamMC406_3608.
GeneID	6179566.
KEGG	bac:BamMC406_3608.
PATRIC	19036855. VBIBurAmb82852_3720.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4160.
HOGENOM	HOG000267552.
KO	K10015.
OMA	ELVSQYW.
ProtClustDB	PRK15069.
Enzyme and pathway databases
BioCyc	BAMB398577:GH38-1786-MONOMER.
Family and domain databases
InterPro	IPR010065. AA_ABC_transptr_permease_3TM. IPR000515. BPD_transp. [Graphical view]
Pfam	PF00528. BPD_transp_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR01726. HEQRo_perm_3TM. 1 hit.
PROSITE	PS50928. ABC_TM1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1Z0F4_BURA4

Accession

Primary (citable) accession number: B1Z0F4

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	May 1, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)