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Protein
Submitted name:

Polar amino acid ABC transporter, inner membrane subunit

Gene

BamMC406_3608

Organism
Burkholderia ambifaria (strain MC40-6)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTransportUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Polar amino acid ABC transporter, inner membrane subunitImported
Gene namesi
Ordered Locus Names:BamMC406_3608Imported
OrganismiBurkholderia ambifaria (strain MC40-6)Imported
Taxonomic identifieri398577 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
Proteomesi
  • UP000001680 Componenti: Chromosome 2

Subcellular locationi

  • Cell membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei20 – 46HelicalUniRule annotationAdd BLAST27
Transmembranei198 – 221HelicalUniRule annotationAdd BLAST24

GO - Cellular componenti

Keywords - Cellular componenti

Cell membraneSAAS annotation, Membrane

Structurei

3D structure databases

ProteinModelPortaliB1Z0F4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini23 – 218ABC transmembrane type-1InterPro annotationAdd BLAST196

Sequence similaritiesi

Belongs to the binding-protein-dependent transport system permease family.UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

HOGENOMiHOG000267552
KOiK10015
OMAiANTIFEQ
OrthoDBiPOG091H0AU2

Family and domain databases

CDDicd06261 TM_PBP2, 1 hit
Gene3Di1.10.3720.10, 1 hit
InterProiView protein in InterPro
IPR010065 AA_ABC_transptr_permease_3TM
IPR000515 MetI-like
IPR035906 MetI-like_sf
PfamiView protein in Pfam
PF00528 BPD_transp_1, 1 hit
SUPFAMiSSF161098 SSF161098, 1 hit
TIGRFAMsiTIGR01726 HEQRo_perm_3TM, 1 hit
PROSITEiView protein in PROSITE
PS50928 ABC_TM1, 1 hit

Sequencei

Sequence statusi: Complete.

B1Z0F4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIELIGQYWQ NYLYTDGYRF SGLAITLWLL VVSIAFGFAL AVPLAIARAS
60 70 80 90 100
SNRWISGPVW LYTYVFRGTP LYVQLLMCYT GIYSLQVVHD HVLLDTFFRN
110 120 130 140 150
AMNCTLLAFV LNECAYATEI FAGAIKATSA GEIEAGMAYG MSRFKLYTRI
160 170 180 190 200
ILPSALRRSL PSYSNEVILM LHATTLAFTA TVPDILKVTR DVNSATYMSF
210 220 230
QAYGIAAVLY AIVVFTLIWA FRKLETRWLA YLSPRGH
Length:237
Mass (Da):26,715
Last modified:May 20, 2008 - v1
Checksum:i28B094A10FCB2FC2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001026 Genomic DNA Translation: ACB66075.1
RefSeqiWP_011660379.1, NC_010552.1

Genome annotation databases

EnsemblBacteriaiACB66075; ACB66075; BamMC406_3608
KEGGibac:BamMC406_3608

Similar proteinsi

Entry informationi

Entry nameiB1Z0F4_BURA4
AccessioniPrimary (citable) accession number: B1Z0F4
Entry historyiIntegrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: March 28, 2018
This is version 72 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
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Main funding by: National Institutes of Health