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B1Z0F4 (B1Z0F4_BURA4) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BamMC406_3608 EMBL ACB66075.1
OrganismBurkholderia ambifaria (strain MC40-6) [Complete proteome] [HAMAP] EMBL ACB66075.1
Taxonomic identifier398577 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex

Protein attributes

Sequence length237 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein By similarity RuleBase RU000478.

Sequence similarities

Belongs to the binding-protein-dependent transport system permease family. RuleBase RU000478

Contains ABC transmembrane type-1 domain. SAAS SAAS000515

Contains ABC transmembrane type-domain. SAAS SAAS000515

Ontologies

Sequences

Sequence LengthMass (Da)Tools
B1Z0F4 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 28B094A10FCB2FC2

FASTA23726,715
        10         20         30         40         50         60 
MIELIGQYWQ NYLYTDGYRF SGLAITLWLL VVSIAFGFAL AVPLAIARAS SNRWISGPVW 

        70         80         90        100        110        120 
LYTYVFRGTP LYVQLLMCYT GIYSLQVVHD HVLLDTFFRN AMNCTLLAFV LNECAYATEI 

       130        140        150        160        170        180 
FAGAIKATSA GEIEAGMAYG MSRFKLYTRI ILPSALRRSL PSYSNEVILM LHATTLAFTA 

       190        200        210        220        230 
TVPDILKVTR DVNSATYMSF QAYGIAAVLY AIVVFTLIWA FRKLETRWLA YLSPRGH 

« Hide

References

[1]"Complete sequence of chromosome 2 of Burkholderia ambifaria MC40-6."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A. expand/collapse author list , Ramette A., Konstantinidis K., Tiedje J., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MC40-6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001026 Genomic DNA. Translation: ACB66075.1.
RefSeqYP_001810291.1. NC_010552.1.

3D structure databases

ProteinModelPortalB1Z0F4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING398577.BamMC406_3608.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB66075; ACB66075; BamMC406_3608.
GeneID6179566.
KEGGbac:BamMC406_3608.
PATRIC19036855. VBIBurAmb82852_3720.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4160.
HOGENOMHOG000267552.
KOK10015.
OMALVSQYWQ.
OrthoDBEOG6MM1R5.

Enzyme and pathway databases

BioCycBAMB398577:GH38-3683-MONOMER.

Family and domain databases

Gene3D1.10.3720.10. 1 hit.
InterProIPR010065. AA_ABC_transptr_permease_3TM.
IPR000515. MetI-like.
[Graphical view]
PfamPF00528. BPD_transp_1. 1 hit.
[Graphical view]
SUPFAMSSF161098. SSF161098. 1 hit.
TIGRFAMsTIGR01726. HEQRo_perm_3TM. 1 hit.
PROSITEPS50928. ABC_TM1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1Z0F4_BURA4
AccessionPrimary (citable) accession number: B1Z0F4
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: June 11, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)