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Protein
Submitted name:

Cytidyltransferase-related domain protein

Gene

BamMC406_4793

Organism
Burkholderia ambifaria (strain MC40-6)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseUniRule annotationSAAS annotation, TransferaseImported

Enzyme and pathway databases

BioCyciBAMB398577:GH38-4870-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytidyltransferase-related domain proteinImported
Gene namesi
Ordered Locus Names:BamMC406_4793Imported
OrganismiBurkholderia ambifaria (strain MC40-6)Imported
Taxonomic identifieri398577 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
Proteomesi
  • UP000001680 Componenti: Chromosome 2

Structurei

3D structure databases

ProteinModelPortaliB1YYL1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini206 – 346141Nudix hydrolaseInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the Nudix hydrolase family.UniRule annotation
Contains nudix hydrolase domain.SAAS annotation

Phylogenomic databases

HOGENOMiHOG000216557.
KOiK13522.
OMAiYPPVFVT.
OrthoDBiPOG091H04OJ.

Family and domain databases

Gene3Di3.40.50.620. 1 hit.
3.90.79.10. 1 hit.
InterProiIPR004821. Cyt_trans-like.
IPR020476. Nudix_hydrolase.
IPR020084. NUDIX_hydrolase_CS.
IPR000086. NUDIX_hydrolase_dom.
IPR015797. NUDIX_hydrolase_dom-like.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
PfamiPF01467. CTP_transf_like. 1 hit.
PF00293. NUDIX. 1 hit.
[Graphical view]
PRINTSiPR00502. NUDIXFAMILY.
SUPFAMiSSF55811. SSF55811. 1 hit.
TIGRFAMsiTIGR00125. cyt_tran_rel. 1 hit.
PROSITEiPS51462. NUDIX. 1 hit.
PS00893. NUDIX_BOX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1YYL1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTQQNRRFD ALVFIGRFQP PHRGHLNVLK SALSRAERVC VLIGSTDKPR
60 70 80 90 100
TIKDPFSFDE RRQMLASLLD ASERERVTIA PVQDSTYNDG DWVRWVQDAV
110 120 130 140 150
AAALGSIAQR KVGLIGHEKD ATSYYLRMFP QWELVDVDAT EDISATEIRD
160 170 180 190 200
QYFAERTNSF VQWAVPEPVF GWLERFRTQP EFAQLKAEAE FIAAYRKAWA
210 220 230 240 250
AAPYPVTFVT VDAMVVHSGH ILLVRRRSEP GRGLWALPGG FVEQDERLDA
260 270 280 290 300
ACIRELREET GLKLPEPVLR GSIKDRQVFD HPTRSLRGRT ITHACLFNFP
310 320 330 340
TGELPRVKGS DDADKARWVP LNEFAQMRNV MFEDHFEIAY HFLGKL
Length:346
Mass (Da):39,603
Last modified:May 20, 2008 - v1
Checksum:i2AACDAEBF90FBB2A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001026 Genomic DNA. Translation: ACB67247.1.
RefSeqiWP_012366534.1. NC_010552.1.

Genome annotation databases

EnsemblBacteriaiACB67247; ACB67247; BamMC406_4793.
KEGGibac:BamMC406_4793.
PATRICi19039367. VBIBurAmb82852_4972.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001026 Genomic DNA. Translation: ACB67247.1.
RefSeqiWP_012366534.1. NC_010552.1.

3D structure databases

ProteinModelPortaliB1YYL1.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB67247; ACB67247; BamMC406_4793.
KEGGibac:BamMC406_4793.
PATRICi19039367. VBIBurAmb82852_4972.

Phylogenomic databases

HOGENOMiHOG000216557.
KOiK13522.
OMAiYPPVFVT.
OrthoDBiPOG091H04OJ.

Enzyme and pathway databases

BioCyciBAMB398577:GH38-4870-MONOMER.

Family and domain databases

Gene3Di3.40.50.620. 1 hit.
3.90.79.10. 1 hit.
InterProiIPR004821. Cyt_trans-like.
IPR020476. Nudix_hydrolase.
IPR020084. NUDIX_hydrolase_CS.
IPR000086. NUDIX_hydrolase_dom.
IPR015797. NUDIX_hydrolase_dom-like.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
PfamiPF01467. CTP_transf_like. 1 hit.
PF00293. NUDIX. 1 hit.
[Graphical view]
PRINTSiPR00502. NUDIXFAMILY.
SUPFAMiSSF55811. SSF55811. 1 hit.
TIGRFAMsiTIGR00125. cyt_tran_rel. 1 hit.
PROSITEiPS51462. NUDIX. 1 hit.
PS00893. NUDIX_BOX. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB1YYL1_BURA4
AccessioniPrimary (citable) accession number: B1YYL1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: September 7, 2016
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.