B1YYJ3 (B1YYJ3_BURA4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cystathionine beta-lyase EMBL ACB67229.1
EC=4.4.1.8 EMBL ACB67229.1

Gene names

Ordered Locus Names:

BamMC406_4775

Organism

Burkholderia ambifaria (strain MC40-6) [Complete proteome] [HAMAP]

Taxonomic identifier

398577 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length	397 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU004507
Sequence similarities	Belongs to the trans-sulfuration enzymes family. RuleBase RU004079

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU004507
Molecular function	Lyase EMBL ACB67229.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular amino acid metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	cystathionine beta-lyase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1YYJ3 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 1CADC81A10519AA6	FASTA	397	42,570
	10 20 30 40 50 60 MTSLHSPDTL LAHEGRSHGQ PGSPVNPPVY RQSTLLFHGT DALDAVRGTP LAYGRHGSPT 70 80 90 100 110 120 TRALEKALAR LEGAHAALLT PSGLSAITTA LLAVLNPGDH LLMADSVYDP TRSFCDETLA 130 140 150 160 170 180 RLGIETTYYD PSIGAGIAAL IRPNTRAIFT ESPGSLTFEV QDIPAICRVA HRHGAVVLLD 190 200 210 220 230 240 NTWGTPLNFR SFSHGIDVSI HAATKYIAGH SDVLMGVILT TEALAQQVTR CYRQLGMTVS 250 260 270 280 290 300 GDDAYLALRG LRTLSVRLER HQRNAQVLTD WLARQPEVAQ ILYPARPGDA GHALWQRDFT 310 320 330 340 350 360 GACGLFGLVL HPQPDDAVRA LLDGMTCFGM GYSWGGFESL IIPSNPSRQR TATQWTAAGP 370 380 390 LLRIHAGLEH PDDMIADLDA GFARMRAAAA AAALAEA

References

[1]

"Complete sequence of chromosome 2 of Burkholderia ambifaria MC40-6." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A. , Ramette A., Konstantinidis K., Tiedje J., Richardson P. Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001026 Genomic DNA. Translation: ACB67229.1.
RefSeq	YP_001811445.1. NC_010552.1.
3D structure databases
ProteinModelPortal	B1YYJ3.
ModBase	Search...
Protein-protein interaction databases
STRING	B1YYJ3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6180256.
GenomeReviews	Gene locus BamMC406_4775 in contig CP001026_GR.
KEGG	bac:BamMC406_4775.
PATRIC	19039331. VBIBurAmb82852_4954.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG754729.
OMA	DDNTWAT.
ProtClustDB	CLSK769977.
Family and domain databases
InterPro	IPR000277. Cys/Met-Metab_PyrdxlP-dep_enz. IPR006233. Cys_b_lyase_bac. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KO	K01760.
PANTHER	PTHR11808:SF8. Cys_b_lyase_bac. 1 hit. PTHR11808. Cys_Met_Meta_PP. 1 hit.
Pfam	PF01053. Cys_Met_Meta_PP. 1 hit. [Graphical view]
PIRSF	PIRSF001434. CGS. 1 hit.
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01324. Cysta_beta_ly_B. 1 hit.
PROSITE	PS00868. CYS_MET_METAB_PP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1YYJ3_BURA4

Accession

Primary (citable) accession number: B1YYJ3

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)