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B1YVS1 (B1YVS1_BURA4) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BamMC406_2504
OrganismBurkholderia ambifaria (strain MC40-6) [Complete proteome] [HAMAP] EMBL ACB64982.1
Taxonomic identifier398577 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex

Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B1YVS1 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: F25E4887AF63642F

FASTA46450,560
        10         20         30         40         50         60 
MTESPSARTP VLLHIGAGSF HRAHQAWYLH RVNAAVPAGE RWSLTVGNIR DDMRATMDAL 

        70         80         90        100        110        120 
AAQHGAYTLE TVTPQGERAY ETIHAISRVL PWSIDLAALI DAGADPACRI VSFTVTEGGY 

       130        140        150        160        170        180 
YLDEHNRLDI ANADLAADLQ GARTTLYGAL AALLAERVAR GAGPLTLQSC DNLRNNGARF 

       190        200        210        220        230        240 
RAGMREFLER RGEAGLLAWF DANVATPSAM VDRITPRPTD DVRERVRAAT GVDDACPVMG 

       250        260        270        280        290        300 
ESFIQWVIED RFAAGRPRWE LAGAELVDDV HPYEEAKIRI LNATHSCIAW AGTLAGHTYI 

       310        320        330        340        350        360 
HEGTHDAAIR RFAHDYVTQD VIPCLSPSPL DLERYRDVVL ERFGNPYVLD TNQRVAADGF 

       370        380        390        400        410        420 
SKIPGFIAPT LVESFARGAA PVATAVLPAL FLRFLERWAR GLLPYAYQDG VMDDGTARAI 

       430        440        450        460 
VEADDPVVAL CASRALWGSL AGNAALFDAL RAGLARVDAW LAQR 

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References

[1]"Complete sequence of chromosome 1 of Burkholderia ambifaria MC40-6."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A. expand/collapse author list , Ramette A., Konstantinidis K., Tiedje J., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001025 Genomic DNA. Translation: ACB64982.1.
RefSeqYP_001809198.1. NC_010551.1.

3D structure databases

ProteinModelPortalB1YVS1.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1YVS1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6178566.
GenomeReviewsGene locus BamMC406_2504 in contig CP001025_GR.
KEGGbac:BamMC406_2504.
PATRIC19034557. VBIBurAmb82852_2577.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG510279.
OMAIARVLPW.
ProtClustDBCLSK889158.

Family and domain databases

InterProIPR008927. 6-PGluconate_DH_C-like.
IPR013328. DH_multihelical.
IPR000669. Mannitol_DH.
IPR013118. Mannitol_DH_C.
IPR013131. Mannitol_DH_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
G3DSA:1.10.1040.10. Opine_DH. 1 hit.
KOK00007.
PfamPF01232. Mannitol_dh. 1 hit.
PF08125. Mannitol_dh_C. 1 hit.
[Graphical view]
PRINTSPR00084. MTLDHDRGNASE.
SUPFAMSSF48179. 6DGDH_C_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1YVS1_BURA4
AccessionPrimary (citable) accession number: B1YVS1
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)