B1YVF6 (B1YVF6_BURA4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
N-acetylmuramoyl-L-alanine amidase EMBL ACB64960.1
EC=3.5.1.28 EMBL ACB64960.1

Gene names

Ordered Locus Names:

BamMC406_2482

Organism

Burkholderia ambifaria (strain MC40-6) [Complete proteome] [HAMAP] EMBL ACB64960.1

Taxonomic identifier

398577 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length	515 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ACB64960.1
Molecular function	Hydrolase EMBL ACB64960.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	N-acetylmuramoyl-L-alanine amidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 49	49	Potential EMBL ACB64960.1
	Chain	50 – 515	466	Potential EMBL ACB64960.1		PRO_5000333232

Sequences

	Sequence		Length	Mass (Da)
	B1YVF6 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 0A9116A6D0630040	FASTA	515	55,461
	10 20 30 40 50 60 MSRKMLIKPF RSIESAATAT HNWRRRQILR AGASTLVLGL AAPRLAHASS VLGVRVWPAR 70 80 90 100 110 120 DYTRVTIESD QPLQNSQQLL QGPDRLVVDL SGLDLDQALR DLVSKIAPND PQIQSVRVGQ 130 140 150 160 170 180 YQPHVVRMVF DLKGSVKPQV FTLPPVGTYK YRLVFDLYPA VAPDPLSDLI AQTERKEQAL 190 200 210 220 230 240 NDTARAQQMQ PPTSLAGPAA PSAPAAGDST DAFFQRFAQN TPATPATPAT PRTPPAAATP 250 260 270 280 290 300 STPAKPAVKP PPVIARRDDS DDDGDTYKFT APKSGKGGTM RLLTVAIDPG HGGEDPGAIG 310 320 330 340 350 360 GGGTYEKHIA LDIAKKLRAK IDGAPNMRAM MTRDADFFVP LNVRVQKARR VGADLFVSIH 370 380 390 400 410 420 ADAFTTPSAR GSSVFALSDH GATSAAARWM ANKENSSDLI GGINIKTQDA AVSRALFDMS 430 440 450 460 470 480 TTAQIRDSLR YGGYVLKEVG GINKLHKGSV EQAGFAVLKA PDIPSILVET AFISNPEEES 490 500 510 RLNDDSYRDQ MADAIFRGIK RYFAANPPLA KNRMA

References

[1]

"Complete sequence of chromosome 1 of Burkholderia ambifaria MC40-6." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A. , Ramette A., Konstantinidis K., Tiedje J., Richardson P. Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001025 Genomic DNA. Translation: ACB64960.1.
RefSeq	YP_001809176.1. NC_010551.1.
3D structure databases
ProteinModelPortal	B1YVF6.
ModBase	Search...
Protein-protein interaction databases
STRING	B1YVF6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6177619.
GenomeReviews	Gene locus BamMC406_2482 in contig CP001025_GR.
KEGG	bac:BamMC406_2482.
PATRIC	19034509. VBIBurAmb82852_2553.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG656726.
OMA	VWPAEDY.
ProtClustDB	CLSK930436.
Family and domain databases
InterPro	IPR021731. AMIN. IPR002508. CW_Hdrlase/autolysin_cat. [Graphical view]
Gene3D	G3DSA:3.40.630.40. Cell_wall_OHase/autolysin_cat. 2 hits.
KO	K01448.
Pfam	PF01520. Amidase_3. 1 hit. PF11741. AMIN. 1 hit. [Graphical view]
SMART	SM00646. Ami_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1YVF6_BURA4

Accession

Primary (citable) accession number: B1YVF6

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)