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B1YUR7

- B1YUR7_BURA4

UniProt

B1YUR7 - B1YUR7_BURA4

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Protein

Phosphoenolpyruvate carboxylase

Gene
ppc, BamMC406_2335
Organism
Burkholderia ambifaria (strain MC40-6)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotations

Cofactori

Magnesium By similarity.UniRule annotationSAAS annotations

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei211 – 2111 By similarityUniRule annotation
Active sitei650 – 6501 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, PyruvateImported

Enzyme and pathway databases

BioCyciBAMB398577:GH38-2403-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:BamMC406_2335Imported
OrganismiBurkholderia ambifaria (strain MC40-6)Imported
Taxonomic identifieri398577 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000001680: Chromosome 1

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi398577.BamMC406_2335.

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238647.
KOiK01595.
OMAiELSTISC.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1YUR7-1 [UniParc]FASTAAdd to Basket

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MKSSGSARTT RRNAALPSSD AQTGTIATAA NGRAKTATKP KDPIPRTKRA    50
IKTSGPAART AKPGVRTRED KDGPLFEDIR FLGRLLGDVV REQEGDTVFD 100
VVETIRQTAV KFRREDDSEA AQTLEKKLRK LTPEQTVSVV RAFSYFSHLA 150
NIAEDRHHNR RRRIHALAGS APQPGTVAYA LEQLKTTGNA SKRLLQRFFD 200
DALIVPVLTA HPTEVQRKSI LDAQHDIARL LAERDQPLTA RERSYNESML 250
RARVTALWQT RMLRDSRLTV GDEIENALSY YRATFLDELP ALYGDIEAAL 300
AEHGLPARVP AFFQMGSWIG GDRDGNPNVT GPTLDEAINR QAAVILEHYL 350
EQVHKLGAEL SVSNLLVGAN DAVKALAAAS PDQSPHRVDE PYRRALIGIY 400
TRLAASARVR LGEGTVPVRS AGRGAPPVRA IPYADSEAFV ADLKVLTASL 450
EEHHGASLAA PRLTPLVRAA EVFGFHLASI DLRQSSDIHE AVVAELFARA 500
GVEADYAALA EEDKLRVLLA ALADPRPLRS PYLEYSALAQ SELGVFEKAR 550
EVRAQFGARA VRNYIISHTE TVSDLVEVLL LQKETGLLEG PLGSHAKNGL 600
MVIPLFETIP DLRDAARIMR EYFALPGIDA LIAHQGAEQE VMLGYSDSNK 650
DGGFLTSNWE LYRAELALVD VFRERKITLR LFHGRGGTVG RGGGPTYQAI 700
LSQPPGTVNG QIRLTEQGEV IASKFANPEI GRRNLETVVA ATLEASLLPQ 750
SNAPAQLPAF EAAMQTLSDA AMASYRALVY ETPGFTDYFF SSTPITEIAE 800
LNIGSRPASR KLQDPKNRKI EDLRAIPWGF SWGQCRLLLT GWYGFGSAVS 850
AYLDGAPDAA ERTKRLTLLK KMNKTWPFFA NLLSNMDMVL AKTDLAVASR 900
YAQLVADRKL RKHVFERIVA EWERTSQALA EITGHEGRLA TNPLLARSIK 950
NRFPYLDPLN HLQVELIKRH RAGDTNARLR RGIHLTINGI AAGLRNTG 998
Length:998
Mass (Da):109,731
Last modified:May 20, 2008 - v1
Checksum:iB43F71A445D89615
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001025 Genomic DNA. Translation: ACB64813.1.
RefSeqiYP_001809029.1. NC_010551.1.

Genome annotation databases

EnsemblBacteriaiACB64813; ACB64813; BamMC406_2335.
GeneIDi6178233.
KEGGibac:BamMC406_2335.
PATRICi19034195. VBIBurAmb82852_2397.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001025 Genomic DNA. Translation: ACB64813.1 .
RefSeqi YP_001809029.1. NC_010551.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 398577.BamMC406_2335.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACB64813 ; ACB64813 ; BamMC406_2335 .
GeneIDi 6178233.
KEGGi bac:BamMC406_2335.
PATRICi 19034195. VBIBurAmb82852_2397.

Phylogenomic databases

eggNOGi COG2352.
HOGENOMi HOG000238647.
KOi K01595.
OMAi ELSTISC.
OrthoDBi EOG6TJ7T8.

Enzyme and pathway databases

BioCyci BAMB398577:GH38-2403-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome 1 of Burkholderia ambifaria MC40-6."
    Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A.
    , Ramette A., Konstantinidis K., Tiedje J., Richardson P.
    Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MC40-6.

Entry informationi

Entry nameiB1YUR7_BURA4
AccessioniPrimary (citable) accession number: B1YUR7
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: June 11, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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