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B1YUR7

- B1YUR7_BURA4

UniProt

B1YUR7 - B1YUR7_BURA4

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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Burkholderia ambifaria (strain MC40-6)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Magnesium.UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei211 – 2111UniRule annotation
Active sitei650 – 6501UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciBAMB398577:GH38-2403-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:BamMC406_2335Imported
OrganismiBurkholderia ambifaria (strain MC40-6)Imported
Taxonomic identifieri398577 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000001680: Chromosome 1

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi398577.BamMC406_2335.

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238647.
KOiK01595.
OMAiELSTISC.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1YUR7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKSSGSARTT RRNAALPSSD AQTGTIATAA NGRAKTATKP KDPIPRTKRA
60 70 80 90 100
IKTSGPAART AKPGVRTRED KDGPLFEDIR FLGRLLGDVV REQEGDTVFD
110 120 130 140 150
VVETIRQTAV KFRREDDSEA AQTLEKKLRK LTPEQTVSVV RAFSYFSHLA
160 170 180 190 200
NIAEDRHHNR RRRIHALAGS APQPGTVAYA LEQLKTTGNA SKRLLQRFFD
210 220 230 240 250
DALIVPVLTA HPTEVQRKSI LDAQHDIARL LAERDQPLTA RERSYNESML
260 270 280 290 300
RARVTALWQT RMLRDSRLTV GDEIENALSY YRATFLDELP ALYGDIEAAL
310 320 330 340 350
AEHGLPARVP AFFQMGSWIG GDRDGNPNVT GPTLDEAINR QAAVILEHYL
360 370 380 390 400
EQVHKLGAEL SVSNLLVGAN DAVKALAAAS PDQSPHRVDE PYRRALIGIY
410 420 430 440 450
TRLAASARVR LGEGTVPVRS AGRGAPPVRA IPYADSEAFV ADLKVLTASL
460 470 480 490 500
EEHHGASLAA PRLTPLVRAA EVFGFHLASI DLRQSSDIHE AVVAELFARA
510 520 530 540 550
GVEADYAALA EEDKLRVLLA ALADPRPLRS PYLEYSALAQ SELGVFEKAR
560 570 580 590 600
EVRAQFGARA VRNYIISHTE TVSDLVEVLL LQKETGLLEG PLGSHAKNGL
610 620 630 640 650
MVIPLFETIP DLRDAARIMR EYFALPGIDA LIAHQGAEQE VMLGYSDSNK
660 670 680 690 700
DGGFLTSNWE LYRAELALVD VFRERKITLR LFHGRGGTVG RGGGPTYQAI
710 720 730 740 750
LSQPPGTVNG QIRLTEQGEV IASKFANPEI GRRNLETVVA ATLEASLLPQ
760 770 780 790 800
SNAPAQLPAF EAAMQTLSDA AMASYRALVY ETPGFTDYFF SSTPITEIAE
810 820 830 840 850
LNIGSRPASR KLQDPKNRKI EDLRAIPWGF SWGQCRLLLT GWYGFGSAVS
860 870 880 890 900
AYLDGAPDAA ERTKRLTLLK KMNKTWPFFA NLLSNMDMVL AKTDLAVASR
910 920 930 940 950
YAQLVADRKL RKHVFERIVA EWERTSQALA EITGHEGRLA TNPLLARSIK
960 970 980 990
NRFPYLDPLN HLQVELIKRH RAGDTNARLR RGIHLTINGI AAGLRNTG
Length:998
Mass (Da):109,731
Last modified:May 20, 2008 - v1
Checksum:iB43F71A445D89615
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001025 Genomic DNA. Translation: ACB64813.1.
RefSeqiYP_001809029.1. NC_010551.1.

Genome annotation databases

EnsemblBacteriaiACB64813; ACB64813; BamMC406_2335.
GeneIDi6178233.
KEGGibac:BamMC406_2335.
PATRICi19034195. VBIBurAmb82852_2397.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001025 Genomic DNA. Translation: ACB64813.1 .
RefSeqi YP_001809029.1. NC_010551.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 398577.BamMC406_2335.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACB64813 ; ACB64813 ; BamMC406_2335 .
GeneIDi 6178233.
KEGGi bac:BamMC406_2335.
PATRICi 19034195. VBIBurAmb82852_2397.

Phylogenomic databases

eggNOGi COG2352.
HOGENOMi HOG000238647.
KOi K01595.
OMAi ELSTISC.
OrthoDBi EOG6TJ7T8.

Enzyme and pathway databases

BioCyci BAMB398577:GH38-2403-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome 1 of Burkholderia ambifaria MC40-6."
    Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A.
    , Ramette A., Konstantinidis K., Tiedje J., Richardson P.
    Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MC40-6Imported.

Entry informationi

Entry nameiB1YUR7_BURA4
AccessioniPrimary (citable) accession number: B1YUR7
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: October 29, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3