B1YT04 (B1YT04_BURA4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Probable allantoicase 1 HAMAP MF_00813
EC=3.5.3.4 HAMAP MF_00813

Alternative name(s):
Allantoate amidinohydrolase 1 HAMAP MF_00813

Gene names

Name:	alc1 HAMAP MF_00813
Ordered Locus Names:	BamMC406_0568

Organism

Burkholderia ambifaria (strain MC40-6) [Complete proteome] [HAMAP] EMBL ACB63065.1

Taxonomic identifier

398577 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length	335 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Allantoate + H2O = (S)-ureidoglycolate + urea. HAMAP MF_00813
Pathway	Nitrogen metabolism; (S)-allantoin degradation; (S)-ureidoglycolate from allantoate (aminidohydrolase route): step 1/1. HAMAP MF_00813
Sequence similarities	Belongs to the allantoicase family. HAMAP MF_00813

Ontologies

Keywords
Biological process	Purine metabolism HAMAP MF_00813
Molecular function	Hydrolase HAMAP MF_00813 EMBL ACB63065.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	allantoin catabolic process Inferred from electronic annotation. Source: HAMAP purine base metabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	allantoicase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1YT04 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: C93382999456FA33	FASTA	335	36,988
	10 20 30 40 50 60 MAAPILDPNA PAFTRRYMNL ADPRLGAQAL FASDEFFAPK ERMLNPEPAV FIPGKYDDHG 70 80 90 100 110 120 KWMDGWETRR KRTTGHDFCV VRLARPGVIY GVDLDTSHFT GNFPPAASID ACAVDGDTPP 130 140 150 160 170 180 DDAEWRTIVP ATTLQGNSHH YVGVDDAQPV THLRVNLYPD GGLARLRVYG QPQRDWRHVP 190 200 210 220 230 240 AGELVDLAAI ENGGYLVAAN NQHFGPASQM LMPGRGANMG DGWETRRRRE PGNDWAIVAL 250 260 270 280 290 300 ARPGIIRRVE VDTAFFKGNF PDRCSLQAAR VAGGTDDSLV TQAMFWAELL GEQKLQMDHV 310 320 330 HTFDQLAALG PVTHVRFNIF PDGGVSRLRL WGEPA

References

[1]

"Complete sequence of chromosome 1 of Burkholderia ambifaria MC40-6." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A. , Ramette A., Konstantinidis K., Tiedje J., Richardson P. Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001025 Genomic DNA. Translation: ACB63065.1.
RefSeq	YP_001807281.1. NC_010551.1.
3D structure databases
ProteinModelPortal	B1YT04.
ModBase	Search...
Protein-protein interaction databases
STRING	B1YT04.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6176604.
GenomeReviews	Gene locus BamMC406_0568 in contig CP001025_GR.
KEGG	bac:BamMC406_0568.
PATRIC	19030446. VBIBurAmb82852_0572.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG480577.
OMA	DTSYFLG.
ProtClustDB	PRK13257.
Family and domain databases
HAMAP	MF_00813. Allantoicase. [Tree]
InterPro	IPR005164. Allantoicase. IPR015908. Allantoicase_dom. IPR008979. Galactose-bd-like. [Graphical view]
KO	K01477.
PANTHER	PTHR12045. Allantoicase. 1 hit.
Pfam	PF03561. Allantoicase. 2 hits. [Graphical view]
PIRSF	PIRSF016516. Allantoicase. 1 hit.
SUPFAM	SSF49785. Gal_bind_like. 2 hits.
TIGRFAMs	TIGR02961. Allantoicase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B1YT04_BURA4

Accession

Primary (citable) accession number: B1YT04

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)