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B1YSX4 (B1YSX4_BURA4) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Shikimate dehydrogenase 1 HAMAP MF_00222
EC=1.1.1.25 HAMAP MF_00222
Gene names
Name:aroE1 HAMAP MF_00222
Ordered Locus Names:BamMC406_0538
OrganismBurkholderia ambifaria (strain MC40-6) [Complete proteome] [HAMAP] EMBL ACB63035.1
Taxonomic identifier398577 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length288 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding136 – 1405NADP By similarity HAMAP MF_00222

Sites

Active site741Proton acceptor By similarity HAMAP MF_00222

Sequences

Sequence LengthMass (Da)Tools
B1YSX4 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 9D94C0A087B2794D

FASTA28829,389
        10         20         30         40         50         60 
MTAIAPTSGA DRYVVFGNPV AHSKSPFIHA QFAAQTGEAI TYEHRLAPVD GFEAAVRAFV 

        70         80         90        100        110        120 
AEGGRGANVT VPFKLDAHAL ADTLSPRAAA AGAVNTLRFD ADGRIHGDNT DGVGLVRDIE 

       130        140        150        160        170        180 
SNLGVSLAGA RILLLGAGGA ARGVVLPMLE RAPLSITIVN RTASKAETLV GQFAQAAHDA 

       190        200        210        220        230        240 
GCVLAGGGPD TVRAEPYDVI VNATAGSLDA ALPECDDAAF GAGTLAYDMM YGAQPTVFMQ 

       250        260        270        280 
HAASLGARTA DGLGMLVEQA AESFFIWRGV RPDGAPVLAA LRQALAAA

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References

[1]"Complete sequence of chromosome 1 of Burkholderia ambifaria MC40-6."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A. expand/collapse author list , Ramette A., Konstantinidis K., Tiedje J., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001025 Genomic DNA. Translation: ACB63035.1.
RefSeqYP_001807251.1. NC_010551.1.

3D structure databases

ProteinModelPortalB1YSX4.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1YSX4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6179110.
GenomeReviewsGene locus BamMC406_0538 in contig CP001025_GR.
KEGGbac:BamMC406_0538.
PATRIC19030377. VBIBurAmb82852_0538.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG553408.
OMAVVFGNPI.
ProtClustDBPRK00258.

Family and domain databases

HAMAPMF_00222. Shikimate_DH_AroE.
[Tree]
InterProIPR016040. NAD(P)-bd_dom.
IPR011342. Shikimate_DH.
IPR013708. Shikimate_DH-bd_N.
IPR022893. Shikimate_quinate_DH.
IPR006151. Shikm_DH/Glu-tRNA_Rdtase.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KOK00014.
PfamPF01488. Shikimate_DH. 1 hit.
PF08501. Shikimate_dh_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR00507. AroE. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1YSX4_BURA4
AccessionPrimary (citable) accession number: B1YSX4
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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