B1YS11 (B1YS11_BURA4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RuleBase RU003490
EC=2.7.7.60 RuleBase RU003490

Gene names

Ordered Locus Names:

BamMC406_1858

Organism

Burkholderia ambifaria (strain MC40-6) [Complete proteome] [HAMAP] EMBL ACB64340.1

Taxonomic identifier

398577 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length	215 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP) By similarity. RuleBase RU003490 SAAS SAAS018294
Catalytic activity	CTP + 2-C-methyl-D-erythritol 4-phosphate = diphosphate + 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol. RuleBase RU003490 SAAS SAAS018294
Pathway	Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-phosphate: step 2/6. SAAS SAAS018294 RuleBase RU004138
Sequence similarities	Belongs to the IspD family. RuleBase RU004393

Ontologies

Keywords
Biological process	Isoprene biosynthesis SAAS SAAS018294 RuleBase RU004393
Molecular function	Nucleotidyltransferase SAAS SAAS018294 RuleBase RU004393 EMBL ACB64340.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	isoprenoid biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1YS11 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 8508978C037854E1	FASTA	215	23,287
	10 20 30 40 50 60 MPKQYRTLAG RALLHYTLAA FDACSEFAQT LVVLAPDDTH FDARRFAGLR FAVRRCGGGS 70 80 90 100 110 120 RQASVLNGLL GLGEFGATDQ DWVLVHDAAR PGITPELIRT LVAALKDDPV GGIVALPVAD 130 140 150 160 170 180 TLKRVPAGGD AIARTESRDA LWQAQTPQMF RIGMLRDAIL RAQREGHDLT DEASAIEWAG 190 200 210 YTPRVVQGSL RNFKVTYPED FALAEAILAR ATNAS

References

[1]

"Complete sequence of chromosome 1 of Burkholderia ambifaria MC40-6." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A. , Ramette A., Konstantinidis K., Tiedje J., Richardson P. Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001025 Genomic DNA. Translation: ACB64340.1.
RefSeq	YP_001808556.1. NC_010551.1.
3D structure databases
ProteinModelPortal	B1YS11.
ModBase	Search...
Protein-protein interaction databases
STRING	B1YS11.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6176616.
GenomeReviews	Gene locus BamMC406_1858 in contig CP001025_GR.
KEGG	bac:BamMC406_1858.
PATRIC	19033170. VBIBurAmb82852_1904.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG672839.
OMA	FPQGAIL.
ProtClustDB	PRK00155.
Family and domain databases
HAMAP	MF_00108. IspD. [Tree]
InterPro	IPR001228. ISPD_synthase. IPR018294. ISPD_synthase_CS. [Graphical view]
KO	K00991.
Pfam	PF01128. IspD. 1 hit. [Graphical view]
TIGRFAMs	TIGR00453. IspD. 1 hit.
PROSITE	PS01295. ISPD. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1YS11_BURA4

Accession

Primary (citable) accession number: B1YS11

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)