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Protein
Submitted name:

Mammalian cell entry related domain protein

Gene

BamMC406_0343

Organism
Burkholderia ambifaria (strain MC40-6)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciBAMB398577:GH38-358-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Mammalian cell entry related domain proteinImported
Gene namesi
Ordered Locus Names:BamMC406_0343Imported
OrganismiBurkholderia ambifaria (strain MC40-6)Imported
Taxonomic identifieri398577 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000001680 Componenti: Chromosome 1

Interactioni

Protein-protein interaction databases

STRINGi398577.BamMC406_0343.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1463.
HOGENOMiHOG000255143.
KOiK02067.
OMAiEQYIGLE.
OrthoDBiEOG6F296G.

Family and domain databases

InterProiIPR003399. Mce-related.
[Graphical view]
PfamiPF02470. MCE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1YRU6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKTALDFWV GLFVVVGFLA VLFLALKVGN MSSLSFQPTY SVRMKFDNIG
60 70 80 90 100
GLKPRAAVKS AGVVVGRVKA IGFDTNTYQA LVTIDVDGQY QFPKDSSAKI
110 120 130 140 150
LTSGLLGEQY IGLDPGGDTE MLKSGDTITM TQSAIVLENL IGQFLYSKAA
160 170 180
DAGGAKPASG ASAAPAAPAA PAPVAVPASA VAGSAAQ
Length:187
Mass (Da):19,131
Last modified:May 19, 2008 - v1
Checksum:i3DCB01C948BEE50F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001025 Genomic DNA. Translation: ACB62844.1.
RefSeqiWP_012362924.1. NC_010551.1.
YP_001807060.1. NC_010551.1.

Genome annotation databases

EnsemblBacteriaiACB62844; ACB62844; BamMC406_0343.
KEGGibac:BamMC406_0343.
PATRICi19029981. VBIBurAmb82852_0348.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001025 Genomic DNA. Translation: ACB62844.1.
RefSeqiWP_012362924.1. NC_010551.1.
YP_001807060.1. NC_010551.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi398577.BamMC406_0343.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB62844; ACB62844; BamMC406_0343.
KEGGibac:BamMC406_0343.
PATRICi19029981. VBIBurAmb82852_0348.

Phylogenomic databases

eggNOGiCOG1463.
HOGENOMiHOG000255143.
KOiK02067.
OMAiEQYIGLE.
OrthoDBiEOG6F296G.

Enzyme and pathway databases

BioCyciBAMB398577:GH38-358-MONOMER.

Family and domain databases

InterProiIPR003399. Mce-related.
[Graphical view]
PfamiPF02470. MCE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 1 of Burkholderia ambifaria MC40-6."
    Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A.
    , Ramette A., Konstantinidis K., Tiedje J., Richardson P.
    Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MC40-6Imported.

Entry informationi

Entry nameiB1YRU6_BURA4
AccessioniPrimary (citable) accession number: B1YRU6
Entry historyi
Integrated into UniProtKB/TrEMBL: May 19, 2008
Last sequence update: May 19, 2008
Last modified: March 31, 2015
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.