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B1YQS2 (B1YQS2_BURA4) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Tetratricopeptide TPR_2 repeat protein EMBL ACB62666.1
Gene names
Ordered Locus Names:BamMC406_0165
OrganismBurkholderia ambifaria (strain MC40-6) [Complete proteome] [HAMAP] EMBL ACB62666.1
Taxonomic identifier398577 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length828 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   DomainRepeat RuleBase RU003537
TPR repeat RuleBase RU003339
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionidentical protein binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1YQS2 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: A3DE01A80B584A18

FASTA82891,560
        10         20         30         40         50         60 
MNDIQQALQE ALAHHQAGRF AQAKTLYDAI LHAQPGQPDA MHFLGLLACQ LKQYDAGLAL 

        70         80         90        100        110        120 
MERSLAERPD ASYFNNLGNM LRECGRLDDA IAHYRRAVAL RPDYPEAHNN LGNALRDARD 

       130        140        150        160        170        180 
PAEAMQSCSR AIELRPGYAE AYNNLGNVLQ DLGELDAAAA SYGKAISFHP AYAEAHSNLG 

       190        200        210        220        230        240 
NVLRAQERHA DAIVHYRRAI ELNPALRVAH RGLAIALRAT DDFDGALEHA RAGLEPDDAE 

       250        260        270        280        290        300 
GHCTLGRSLR SMNDFDGAAR LFERACEIDP GYAPAWCRLG ELRCQQGEYE ESLRLCRHAI 

       310        320        330        340        350        360 
ELDPELADAY NFLGLAYHNL DRMAASELSH RHAIDLNPDD ADAHHNLAAA LFRLDKLDEA 

       370        380        390        400        410        420 
MSEYRIAQEL GVDPVKIQLT LGDILWAKRD FAGAVAAFRE AVEHDPHRAY ARLLFNMSSS 

       430        440        450        460        470        480 
PAFAPEEWVV DAQRYGDYLA RDARLLSHDR EQRARQARGR PLRVGFVSGD LRQHPVGIFL 

       490        500        510        520        530        540 
ESVLAHLDRT RIEPHAYVTF VVEDDVTARL KSGFASWKKL TCLNRDQAAR MIHDDGIDVL 

       550        560        570        580        590        600 
VDLAGHTNWS GLPVFAHRPA PVQASWLGFF ATTGCRAIDY FIGDPHTLPA DEAHHFVEQP 

       610        620        630        640        650        660 
WHLPDSYLCF TPPAYDVAVG PLPMATNGGV TFGCFGKLTK ISDDVIALWS RLLHALPDAR 

       670        680        690        700        710        720 
LMLKAHELGA SDLNRATLER FARHGIGSHQ LILEGGSPRA EYFNAYNRID IALSPFPYPG 

       730        740        750        760        770        780 
GTTTAEALWM GVPVIGMKGG RFVTHICESL LHAAGMGDWI AADEDAYLAK AIAFARDRDA 

       790        800        810        820 
LAALRATLRE RTLASPLCDA ARFARNLEDA FHGMWARYVA GDTDGTRT

« Hide

References

[1]"Complete sequence of chromosome 1 of Burkholderia ambifaria MC40-6."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A. expand/collapse author list , Ramette A., Konstantinidis K., Tiedje J., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001025 Genomic DNA. Translation: ACB62666.1.
RefSeqYP_001806882.1. NC_010551.1.

3D structure databases

ProteinModelPortalB1YQS2.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1YQS2.

Protein family/group databases

CAZyGT41. Glycosyltransferase Family 41.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6176172.
GenomeReviewsGene locus BamMC406_0165 in contig CP001025_GR.
KEGGbac:BamMC406_0165.
PATRIC19029589. VBIBurAmb82852_0162.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG684498.
OMARIEPHAY.
ProtClustDBCLSK770199.

Family and domain databases

InterProIPR001440. TPR-1.
IPR011717. TPR-4.
IPR013026. TPR-contain.
IPR011990. TPR-like_helical.
IPR013105. TPR_2.
IPR019734. TPR_repeat.
[Graphical view]
Gene3DG3DSA:1.25.40.10. TPR-like_helical. 2 hits.
PfamPF00515. TPR_1. 5 hits.
PF07719. TPR_2. 1 hit.
PF07721. TPR_4. 1 hit.
[Graphical view]
SMARTSM00028. TPR. 10 hits.
[Graphical view]
PROSITEPS50005. TPR. 10 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1YQS2_BURA4
AccessionPrimary (citable) accession number: B1YQS2
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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