B1YPI1 (RPIA_BURA4) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Ribose-5-phosphate isomerase A
EC=5.3.1.6

Alternative name(s):
Phosphoriboisomerase A
Short name=PRI

Gene names

Name:	rpiA
Ordered Locus Names:	BamMC406_1471

Organism

Burkholderia ambifaria (strain MC40-6) [Complete proteome] [HAMAP]

Taxonomic identifier

398577 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex

Protein attributes

Sequence length	230 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family.

Ontologies

Keywords
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: InterPro
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 230	230	Ribose-5-phosphate isomerase A HAMAP MF_00170		PRO_1000097650

Sequences

	Sequence		Length	Mass (Da)
	B1YPI1 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: FCB4DFB0F7F81DB0	FASTA	230	23,907
	10 20 30 40 50 60 MTQDELKRLV GQAAADYVIQ NVPEGAVIGV GTGSTANCFI DALAAVKSRY RGAVSSSVAT 70 80 90 100 110 120 TERLKSHGIK VFDLNEIESL QVYVDGADEI DASGAMIKGG GGALTREKIV ASVADTFVCI 130 140 150 160 170 180 ADGSKRVPVL GAFPLPIEVV PMARTAIGRR VTALGGVPVL RVTQDGAPYI TDNGNEIIDV 190 200 210 220 230 KGLQIVDPRG FEAQINAWPG VVTVGLFAER GANLCLLGTP NGVETIVYPG

References

[1]

"Complete sequence of chromosome 1 of Burkholderia ambifaria MC40-6." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Lang D., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A. , Ramette A., Konstantinidis K., Tiedje J., Richardson P. Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MC40-6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001025 Genomic DNA. Translation: ACB63958.1.
RefSeq	YP_001808174.1. NC_010551.1.
3D structure databases
ProteinModelPortal	B1YPI1.
SMR	B1YPI1. Positions 1-227.
ModBase	Search...
Protein-protein interaction databases
STRING	B1YPI1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6178032.
GenomeReviews	Gene locus BamMC406_1471 in contig CP001025_GR.
KEGG	bac:BamMC406_1471.
PATRIC	19032356. VBIBurAmb82852_1504.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG515603.
OMA	NLSLYVD.
ProtClustDB	PRK00702.
Enzyme and pathway databases
BioCyc	BAMB398577:BAMMC406_1471-MONOMER.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. [Graphical view]
KO	K01807.
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. RpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RPIA_BURA4

Accession

Primary (citable) accession number: B1YPI1

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 24, 2009
Last sequence update:	May 20, 2008
Last modified:	January 25, 2012
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program