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B1YLX3

- B1YLX3_EXIS2

UniProt

B1YLX3 - B1YLX3_EXIS2

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Protein
Submitted name:

Alpha amylase catalytic region

Gene
Exig_0976
Organism
Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciESIB262543:GHBP-1052-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Exig_0976Imported
OrganismiExiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)Imported
Taxonomic identifieri262543 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillales Family XII. Incertae SedisExiguobacterium
ProteomesiUP000001681: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3131 PredictedImportedAdd
BLAST
Chaini32 – 513482 PredictedImportedPRO_5000332657Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi262543.Exig_0976.

Structurei

3D structure databases

ProteinModelPortaliB1YLX3.
SMRiB1YLX3. Positions 32-513.

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000094847.
KOiK01176.
OMAiRATKYGD.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

B1YLX3-1 [UniParc]FASTAAdd to Basket

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MKQKRLIVAT LATATFLAPL VQPIAVGATA DNGTMMQYFE WYVPNDGNHW    50
NRLGSDSTKL DQLGITSVWI PPAYKGTTQN DVGYGAYDLY DLGEFNQKGT 100
VRTKYGTKAQ LKTAINQLHT AGIDVYGDVV MNHKGGADFT EAVTAVEVNG 150
SNRNQEISGD YQIQAWTGFD FAARNNTYSN FKWKWYHFDG TDWDQSRSKS 200
AIYKFRGTGK AWDTDVSTEN GNYDYLMYAD IDFDHPEVQQ EMKNWGKWYV 250
NELGLDGFRL DAVKHIKHGY LADWLANVRQ TTGKPLFTVA EYWQNDLGTL 300
QNYLSRTNYQ QSVFDAPLHY KFEQASKGGG YYDMRTIFDG TLVKTNPVQA 350
VTLVENHDSQ PGQSLESTVQ SWFKPLAYAM ILTREQGYPS VFYGDYYGTK 400
GTSNREIPAL ASKIDPLLKA RKDFAFGKQN DYLDNADVIG WTREGVTDRA 450
KSGLATILSD GPGGSKWMYV GLQNKGEVWT DITGNNTASV TINQDGYGQF 500
FVNGGSVSVY RQQ 513
Length:513
Mass (Da):57,606
Last modified:May 20, 2008 - v1
Checksum:i9816F477C3FEEC8E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001022 Genomic DNA. Translation: ACB60456.1.
RefSeqiYP_001813473.1. NC_010556.1.

Genome annotation databases

EnsemblBacteriaiACB60456; ACB60456; Exig_0976.
GeneIDi6174682.
KEGGiesi:Exig_0976.
PATRICi32135537. VBIExiSib53410_0994.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001022 Genomic DNA. Translation: ACB60456.1 .
RefSeqi YP_001813473.1. NC_010556.1.

3D structure databases

ProteinModelPortali B1YLX3.
SMRi B1YLX3. Positions 32-513.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 262543.Exig_0976.

Protein family/group databases

CAZyi GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACB60456 ; ACB60456 ; Exig_0976 .
GeneIDi 6174682.
KEGGi esi:Exig_0976.
PATRICi 32135537. VBIExiSib53410_0994.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000094847.
KOi K01176.
OMAi RATKYGD.
OrthoDBi EOG65QWH3.

Enzyme and pathway databases

BioCyci ESIB262543:GHBP-1052-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 17290 / JCM 13490 / 255-15.

Entry informationi

Entry nameiB1YLX3_EXIS2
AccessioniPrimary (citable) accession number: B1YLX3
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: May 14, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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