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B1YLX3

- B1YLX3_EXIS2

UniProt

B1YLX3 - B1YLX3_EXIS2

Protein
Submitted name:

Alpha amylase catalytic region

Gene

Exig_0976

Organism
Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (20 May 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. calcium ion binding Source: InterPro
    2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciESIB262543:GHBP-1052-MONOMER.

    Protein family/group databases

    CAZyiGH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase catalytic regionImported
    Gene namesi
    Ordered Locus Names:Exig_0976Imported
    OrganismiExiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)Imported
    Taxonomic identifieri262543 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillales Family XII. Incertae SedisExiguobacterium
    ProteomesiUP000001681: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 3131 PotentialImportedAdd
    BLAST
    Chaini32 – 513482 PotentialImportedPRO_5000332657Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi262543.Exig_0976.

    Structurei

    3D structure databases

    ProteinModelPortaliB1YLX3.
    SMRiB1YLX3. Positions 32-513.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000094847.
    KOiK01176.
    OMAiRATKYGD.
    OrthoDBiEOG65QWH3.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR013776. A-amylase_thermo.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    B1YLX3-1 [UniParc]FASTAAdd to Basket

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    MKQKRLIVAT LATATFLAPL VQPIAVGATA DNGTMMQYFE WYVPNDGNHW    50
    NRLGSDSTKL DQLGITSVWI PPAYKGTTQN DVGYGAYDLY DLGEFNQKGT 100
    VRTKYGTKAQ LKTAINQLHT AGIDVYGDVV MNHKGGADFT EAVTAVEVNG 150
    SNRNQEISGD YQIQAWTGFD FAARNNTYSN FKWKWYHFDG TDWDQSRSKS 200
    AIYKFRGTGK AWDTDVSTEN GNYDYLMYAD IDFDHPEVQQ EMKNWGKWYV 250
    NELGLDGFRL DAVKHIKHGY LADWLANVRQ TTGKPLFTVA EYWQNDLGTL 300
    QNYLSRTNYQ QSVFDAPLHY KFEQASKGGG YYDMRTIFDG TLVKTNPVQA 350
    VTLVENHDSQ PGQSLESTVQ SWFKPLAYAM ILTREQGYPS VFYGDYYGTK 400
    GTSNREIPAL ASKIDPLLKA RKDFAFGKQN DYLDNADVIG WTREGVTDRA 450
    KSGLATILSD GPGGSKWMYV GLQNKGEVWT DITGNNTASV TINQDGYGQF 500
    FVNGGSVSVY RQQ 513
    Length:513
    Mass (Da):57,606
    Last modified:May 20, 2008 - v1
    Checksum:i9816F477C3FEEC8E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001022 Genomic DNA. Translation: ACB60456.1.
    RefSeqiYP_001813473.1. NC_010556.1.

    Genome annotation databases

    EnsemblBacteriaiACB60456; ACB60456; Exig_0976.
    GeneIDi6174682.
    KEGGiesi:Exig_0976.
    PATRICi32135537. VBIExiSib53410_0994.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001022 Genomic DNA. Translation: ACB60456.1 .
    RefSeqi YP_001813473.1. NC_010556.1.

    3D structure databases

    ProteinModelPortali B1YLX3.
    SMRi B1YLX3. Positions 32-513.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 262543.Exig_0976.

    Protein family/group databases

    CAZyi GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACB60456 ; ACB60456 ; Exig_0976 .
    GeneIDi 6174682.
    KEGGi esi:Exig_0976.
    PATRICi 32135537. VBIExiSib53410_0994.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000094847.
    KOi K01176.
    OMAi RATKYGD.
    OrthoDBi EOG65QWH3.

    Enzyme and pathway databases

    BioCyci ESIB262543:GHBP-1052-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR013776. A-amylase_thermo.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 17290 / JCM 13490 / 255-15Imported.

    Entry informationi

    Entry nameiB1YLX3_EXIS2
    AccessioniPrimary (citable) accession number: B1YLX3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 20, 2008
    Last sequence update: May 20, 2008
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3