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B1YLX3 (B1YLX3_EXIS2) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length513 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3131 Potential EMBL ACB60456.1
Chain32 – 513482 Potential EMBL ACB60456.1
PRO_5000332657

Sequences

Sequence LengthMass (Da)Tools
B1YLX3 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 9816F477C3FEEC8E

FASTA51357,606
        10         20         30         40         50         60 
MKQKRLIVAT LATATFLAPL VQPIAVGATA DNGTMMQYFE WYVPNDGNHW NRLGSDSTKL 

        70         80         90        100        110        120 
DQLGITSVWI PPAYKGTTQN DVGYGAYDLY DLGEFNQKGT VRTKYGTKAQ LKTAINQLHT 

       130        140        150        160        170        180 
AGIDVYGDVV MNHKGGADFT EAVTAVEVNG SNRNQEISGD YQIQAWTGFD FAARNNTYSN 

       190        200        210        220        230        240 
FKWKWYHFDG TDWDQSRSKS AIYKFRGTGK AWDTDVSTEN GNYDYLMYAD IDFDHPEVQQ 

       250        260        270        280        290        300 
EMKNWGKWYV NELGLDGFRL DAVKHIKHGY LADWLANVRQ TTGKPLFTVA EYWQNDLGTL 

       310        320        330        340        350        360 
QNYLSRTNYQ QSVFDAPLHY KFEQASKGGG YYDMRTIFDG TLVKTNPVQA VTLVENHDSQ 

       370        380        390        400        410        420 
PGQSLESTVQ SWFKPLAYAM ILTREQGYPS VFYGDYYGTK GTSNREIPAL ASKIDPLLKA 

       430        440        450        460        470        480 
RKDFAFGKQN DYLDNADVIG WTREGVTDRA KSGLATILSD GPGGSKWMYV GLQNKGEVWT 

       490        500        510 
DITGNNTASV TINQDGYGQF FVNGGSVSVY RQQ 

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References

[1]"Complete sequence of chromosome of Exiguobacterium sibiricum 255-15."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Chertkov O., Monk C., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Mikhailova N., Vishnivetskaya T., Rodrigues D.F., Gilichinsky D., Tiedje J., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17290 / JCM 13490 / 255-15.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001022 Genomic DNA. Translation: ACB60456.1.
RefSeqYP_001813473.1. NC_010556.1.

3D structure databases

ProteinModelPortalB1YLX3.
SMRB1YLX3. Positions 32-513.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING262543.Exig_0976.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB60456; ACB60456; Exig_0976.
GeneID6174682.
KEGGesi:Exig_0976.
PATRIC32135537. VBIExiSib53410_0994.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000094847.
KOK01176.
OMARATKYGD.
OrthoDBEOG65QWH3.

Enzyme and pathway databases

BioCycESIB262543:GHBP-1052-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1YLX3_EXIS2
AccessionPrimary (citable) accession number: B1YLX3
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: May 14, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)