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B1YLA5 (B1YLA5_EXIS2) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length486 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B1YLA5 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: BF749DD6EE4D2D70

FASTA48656,314
        10         20         30         40         50         60 
MERNHTMMQF FEWHVENDGK HWQRLKERAP ELRAAGITSV WIPPASKGQS DEDTGYGIYD 

        70         80         90        100        110        120 
VYDLGEFDQK GTVRTKYGTK DELIEAIQVA HENDIAVYAD VVMNHKAAAD ELETINVVEV 

       130        140        150        160        170        180 
HPEDRSKEIS EEFEIEAWTK FTFPGRNGKY SDFIWTHEFF NGTDFDAREE KTGVFKISGK 

       190        200        210        220        230        240 
NKDWNDQVDN EFGNYDYLMF ANIDYNHPEV REEMINWGNW FKETINCQGF RLDAIKHINY 

       250        260        270        280        290        300 
EFVNEFAKSM IGDDPDGFYM VGEFWKSDLD DCRQFLDSVD YTIDLFDVPL HYKFHEASQQ 

       310        320        330        340        350        360 
GQDFDLTTLF ADTLVESHPT NAVTFVDNHD SQPGESLESW IDDWFKQHAY ASVLLRKDGY 

       370        380        390        400        410        420 
PCVFYGDYYG VQGPHPVEGK KEMIDALLYT RYHKAYGEQE DYMDDAHCVG WVRRGVEEFP 

       430        440        450        460        470        480 
NSGCAVLLSN ADMCEKRMFV GETRAGEEWF DYTNHQEEPV VIDEEGFGVF PVPGGGVSVF 


APRDEQ 

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References

[1]"Complete sequence of chromosome of Exiguobacterium sibiricum 255-15."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Chertkov O., Monk C., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Mikhailova N., Vishnivetskaya T., Rodrigues D.F., Gilichinsky D., Tiedje J., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17290 / JCM 13490 / 255-15.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001022 Genomic DNA. Translation: ACB60337.1.
RefSeqYP_001813354.1. NC_010556.1.

3D structure databases

ProteinModelPortalB1YLA5.
SMRB1YLA5. Positions 2-483.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING262543.Exig_0857.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB60337; ACB60337; Exig_0857.
GeneID6172825.
KEGGesi:Exig_0857.
PATRIC32135295. VBIExiSib53410_0873.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000094847.
KOK01176.
OMAFNGTDYD.
OrthoDBEOG65QWH3.

Enzyme and pathway databases

BioCycESIB262543:GHBP-933-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1YLA5_EXIS2
AccessionPrimary (citable) accession number: B1YLA5
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: May 14, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)