B1YKP7 (B1YKP7_EXIS2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha amylase catalytic region EMBL ACB60230.1

Gene names

Ordered Locus Names:

Exig_0749

Organism

Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) [Complete proteome] [HAMAP]

Taxonomic identifier

262543 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillales Family XII. Incertae Sedis › Exiguobacterium

Protein attributes

Sequence length	595 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1YKP7 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: DFE78DD8E0F095C0	FASTA	595	68,987
	10 20 30 40 50 60 MLKEAVFHRA MSPFVYKYDD KTIHVRLQTK KNDVDHVDLI WGDPYDWHTE NPDDADWNFD 70 80 90 100 110 120 PSKSNYWNTF ETPMKRSGSD ELFDYWFIDV VPPFRRLRYG FRLHDGHSSQ VFTERGWFDE 130 140 150 160 170 180 KPLDDTGYYF CVPFLNKVDV FHAPDWVKDT VWYQIFPDRF ANGDSTNDPA GTLPWNSTAP 190 200 210 220 230 240 TTTNLFGGDF QGVIDKIDYL VDLGITGIYF CPIFEAKSNH KYDTIDYLEI DPQFGTKEKF 250 260 270 280 290 300 KEMVDLLHAN GIRIMLDAVF NHAGFHHKAF ADIREHGSNS SYRDWFHLRN FPLVTEPMPN 310 320 330 340 350 360 YDTFAFVPEM PKFNTENPEV KEYLLHVARY WVEEFGIDGW RLDVANEVDH AFWRDFRSVV 370 380 390 400 410 420 KEADPETYIL GEIWHDSQEW LLGDQFDAVM NYPFTNAALN FFALDKTSAS TYANDMSHVL 430 440 450 460 470 480 FSNTVNVNEV SFNLIGSHDT PRALTRAGND KNKMRLLLLS MLTFSGSPVI YYGDEIGLDG 490 500 510 520 530 540 DQDPGCRKCM PWNPEEQDLN LLMYTKHLLQ LRKQHRTLAN HGQISFVHAD DETNTIVMRR 550 560 570 580 590 MSQDGTYYVY FNNSNHQATI PAPQSGQGMD LFSNTPLPSL EVTLAPYTGT IIQVI

References

[1]

"Complete sequence of chromosome of Exiguobacterium sibiricum 255-15." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Chertkov O., Monk C., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F. , Land M., Hauser L., Kyrpides N., Mikhailova N., Vishnivetskaya T., Rodrigues D.F., Gilichinsky D., Tiedje J., Richardson P. Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 17290 / JCM 13490 / 255-15.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001022 Genomic DNA. Translation: ACB60230.1.
RefSeq	YP_001813247.1. NC_010556.1.
3D structure databases
ProteinModelPortal	B1YKP7.
SMR	B1YKP7. Positions 1-594.
ModBase	Search...
Protein-protein interaction databases
STRING	B1YKP7.
Protein family/group databases
CAZy	CBM34. Carbohydrate-Binding Module Family 34. GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6173899.
GenomeReviews	Gene locus Exig_0749 in contig CP001022_GR.
KEGG	esi:Exig_0749.
PATRIC	32135071. VBIExiSib53410_0763.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG726713.
OMA	RAFPWDE.
ProtClustDB	CLSK2335389.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR004185. Glyco_hydro_13_lg-like_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02903. Alpha-amylase_N. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF81296. Ig_E-set. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B1YKP7_EXIS2

Accession

Primary (citable) accession number: B1YKP7

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)