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Protein

Glycogen synthase

Gene

glgA

Organism
Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathway: glycogen biosynthesis

This protein is involved in the pathway glycogen biosynthesis, which is part of Glycan biosynthesis.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway glycogen biosynthesis and in Glycan biosynthesis.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucoseUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciESIB262543:GHBP-744-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:Exig_0670
OrganismiExiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)
Taxonomic identifieri262543 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillales Family XII. Incertae SedisExiguobacterium
ProteomesiUP000001681 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 483483Glycogen synthasePRO_1000126076Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi262543.Exig_0670.

Structurei

3D structure databases

ProteinModelPortaliB1YK70.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiPVWMHQD.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

B1YK70-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVWFAATEA TPFIKTGGLA DVVGSLPLAL AEEGAEVSVI LPNYGQIKEQ
60 70 80 90 100
YKLEMEFLFD FIVPVGWRQQ FGAVLRLKQD GVTFYFIDNE YYFKRDGVIY
110 120 130 140 150
GHYDDAERFA YFSRAVLEMI QRVDAEEVPD VIHCHDWQTG VLPAFLRIHY
160 170 180 190 200
QHLNRYQEIK TVFTIHNLQY QGVFPEEVLG DLLGLSHEHF TAEGIAHNGL
210 220 230 240 250
VNYMKAGLVH ANQITTVSPS YRDEIMDPYY GETLEPVLQH RAVDVRGILN
260 270 280 290 300
GIDYRQFSPE TDEHLVENYD VKTVEEGKAA NKAALQQELG LPVNPDVPLF
310 320 330 340 350
GFVSRLVDQK GIDLLAHILP DLFELDAQFI ILGSGEAEYE GLFQHASTIR
360 370 380 390 400
PDKVASYIGF DVGLAQRIYA GSDAFLMPSR FEPCGLSQLI SMKYGSLPIV
410 420 430 440 450
RETGGLRDTV QPFNQFTLEG NGFSFSNYNA QEFLDAIKRT IETYHDKPVF
460 470 480
KHLIETAMQE DFSWIRSADE YLALYRLIAP SAD
Length:483
Mass (Da):54,769
Last modified:May 20, 2008 - v1
Checksum:i1A89C1F4170C3060
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001022 Genomic DNA. Translation: ACB60151.1.
RefSeqiWP_012369575.1. NC_010556.1.
YP_001813168.1. NC_010556.1.

Genome annotation databases

EnsemblBacteriaiACB60151; ACB60151; Exig_0670.
KEGGiesi:Exig_0670.
PATRICi32134915. VBIExiSib53410_0685.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001022 Genomic DNA. Translation: ACB60151.1.
RefSeqiWP_012369575.1. NC_010556.1.
YP_001813168.1. NC_010556.1.

3D structure databases

ProteinModelPortaliB1YK70.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi262543.Exig_0670.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB60151; ACB60151; Exig_0670.
KEGGiesi:Exig_0670.
PATRICi32134915. VBIExiSib53410_0685.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiPVWMHQD.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciESIB262543:GHBP-744-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. GS/SS.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 17290 / JCM 13490 / 255-15.

Entry informationi

Entry nameiGLGA_EXIS2
AccessioniPrimary (citable) accession number: B1YK70
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: May 20, 2008
Last modified: June 24, 2015
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.