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B1YHH2 (B1YHH2_EXIS2) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alpha amylase catalytic region EMBL ACB61145.1
Gene names
Ordered Locus Names:Exig_1692
OrganismExiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) [Complete proteome] [HAMAP]
Taxonomic identifier262543 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillales Family XII. Incertae Sedis › Exiguobacterium

Protein attributes

Sequence length594 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionbeta-galactosidase activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1YHH2 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: EC1576596385EDAD

FASTA59468,280
        10         20         30         40         50         60 
MNKAAVFHRA LSPYVYTYDQ EAVHIRLMSA KGDLDRIELI HGDPYEWDAE KEEDRDWNFD 

        70         80         90        100        110        120 
PDKEKFWKTE TTDMTFAGSD ATHDFWFVAI RPPKKRVRYG FNVHANGESA VYTERGWYDE 

       130        140        150        160        170        180 
VPLDHPGYYF AVPYMNAVDV FDAPSWVKDT VWYQIFPDRF ANGDLTNDRP GTIAWGAEAP 

       190        200        210        220        230        240 
AFDNHFGGDF QGVIDHIDYL KELGITGIYF CPVFVAPSNH KYDTLDYLRL DPAFGTEETF 

       250        260        270        280        290        300 
REMIHLLHQN GIRILLDAVF NHVSVDHPAF QDVIAHGNES QYANWFMMDS FPVQSTPVPN 

       310        320        330        340        350        360 
YEVFAFEGNM PKLNTAHPDV KEYLLKVGRY WVEEFHVDGW RLDVASEVDH AFWREFRREV 

       370        380        390        400        410        420 
RAANPEAYIV GECWTDSQPW LLGDQFDAVM NYGLTEAFLT FFATNESTAS EFSHAIVRNL 

       430        440        450        460        470        480 
NSNTMNVNEV MFNLVDSHDT PRALTRANGD RDRMKLLMLS LLTFTGSPVI YYGDEIGMTG 

       490        500        510        520        530        540 
GQDPDNRKCM VWDQAEQDRD LLAYITKLVD LRKSHPALAN ASGYQFEQMD DETASFLVRR 

       550        560        570        580        590 
QSDEATYLIG FNNGSEEIRF DLDKAAVDLM DGQRYLGTVT VRPLSGKILR VETT

« Hide

References

[1]"Complete sequence of chromosome of Exiguobacterium sibiricum 255-15."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Chertkov O., Monk C., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Mikhailova N., Vishnivetskaya T., Rodrigues D.F., Gilichinsky D., Tiedje J., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17290 / JCM 13490 / 255-15.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001022 Genomic DNA. Translation: ACB61145.1.
RefSeqYP_001814162.1. NC_010556.1.

3D structure databases

ProteinModelPortalB1YHH2.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1YHH2.

Protein family/group databases

CAZyCBM34. Carbohydrate-Binding Module Family 34.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6175272.
GenomeReviewsGene locus Exig_1692 in contig CP001022_GR.
KEGGesi:Exig_1692.
PATRIC32136992. VBIExiSib53410_1721.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG726713.
OMAFHINEYP.
ProtClustDBCLSK2335389.

Family and domain databases

InterProIPR015902. Alpha_amylase.
IPR013739. Beta_galactosidase_C.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004185. Glyco_hydro_13_lg-like_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHERPTHR10357. Alpha_amylase. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02903. Alpha-amylase_N. 1 hit.
PF08533. Glyco_hydro_42C. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
SSF81296. Ig_E-set. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1YHH2_EXIS2
AccessionPrimary (citable) accession number: B1YHH2
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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