Skip Header

Contribute Send feedback
Read comments (?) or add your own

B1YHD3 (B1YHD3_EXIS2) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Exig_0179
OrganismExiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) [Complete proteome] [HAMAP]
Taxonomic identifier262543 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacillalesBacillales Family XII. Incertae SedisExiguobacterium

Protein attributes

Sequence length207 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine By similarity. SAAS SAAS017484

Catalytic activity

N-formyl-L-kynurenine + H2O = formate + L-kynurenine. SAAS SAAS017484

Pathway

Amino-acid degradation; L-tryptophan degradation via kynurenine pathway; L-kynurenine from L-tryptophan: step 2/2. SAAS SAAS017484

Ontologies

Keywords
   Biological processTryptophan catabolism SAAS SAAS017484
   Molecular functionHydrolase SAAS SAAS017484
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtryptophan catabolic process to kynurenine

Inferred from electronic annotation. Source: InterPro

   Molecular functionformamidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1YHD3 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 18AFDAE805069419

FASTA20722,658
        10         20         30         40         50         60 
MNRWMDVSQP LTSSITTWPG DTKFDYTINW SKADTGSVNV GQVTMSLHTG THIDAPFHFD 

        70         80         90        100        110        120 
DVGQKVIDLD PDLYIGHVRV IYLPGRTELV ASDLDAFDLT DVRRLIIKTD GWVDKSVFPE 

       130        140        150        160        170        180 
TIPVLTPSLA ERLGELGIEL IGLDLPSVDA IDSKEMAAHH ALAAHGVHIL EGLVLDTITP 

       190        200 
GDYHLNAVPL PLVDGDGSPV RALMRPY 

« Hide

References

[1]"Complete sequence of chromosome of Exiguobacterium sibiricum 255-15."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Chertkov O., Monk C., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Mikhailova N., Vishnivetskaya T., Rodrigues D.F., Gilichinsky D., Tiedje J., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17290 / JCM 13490 / 255-15.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001022 Genomic DNA. Translation: ACB59665.1.
RefSeqYP_001812682.1. NC_010556.1.

3D structure databases

ProteinModelPortalB1YHD3.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1YHD3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6174876.
GenomeReviewsGene locus Exig_0179 in contig CP001022_GR.
KEGGesi:Exig_0179.
PATRIC32133879. VBIExiSib53410_0191.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG686791.
OMAFERVPAN.
ProtClustDBCLSK2800114.

Family and domain databases

InterProIPR017484. Arylformamidase.
IPR007325. Cyclase.
[Graphical view]
KOK07130.
PfamPF04199. Cyclase. 1 hit.
[Graphical view]
TIGRFAMsTIGR03035. Trp_arylform. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1YHD3_EXIS2
AccessionPrimary (citable) accession number: B1YHD3
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)