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B1YGN7 (B1YGN7_EXIS2) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Hydrolase, TatD family EMBL ACB59520.1
Gene names
Ordered Locus Names:Exig_0033
OrganismExiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) [Complete proteome] [HAMAP]
Taxonomic identifier262543 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillales Family XII. Incertae Sedis › Exiguobacterium

Protein attributes

Sequence length255 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ACB59520.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionendodeoxyribonuclease activity, producing 5'-phosphomonoesters

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1YGN7 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 47E95EBBE6A9C480

FASTA25529,047
        10         20         30         40         50         60 
MLIDTHTHLN SDQFDGDVEE TIERARANGV SPMIVVGFDH KTIDRAMELV EQYDDLYAVI 

        70         80         90        100        110        120 
GWHPVDSIDF DDAAYEKVGR LMDHPKVVAL GEIGLDYHWD TSPKDVQDAA FRKQIRLAKQ 

       130        140        150        160        170        180 
KNKPIVIHNR EATEDTLRIL EEEDAKEVGG ILHSYSMSAE LLPRCLAMNF YISLGGPVTF 

       190        200        210        220        230        240 
KNAKMPKRVA QEVPLDRLLV ETDCPYLTPT PYRGKRNEPA YVRFVAEEIA QLRGMMYADI 

       250 
EQATTENAKR VFRLP

« Hide

References

[1]"Complete sequence of chromosome of Exiguobacterium sibiricum 255-15."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kiss H., Chertkov O., Monk C., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Mikhailova N., Vishnivetskaya T., Rodrigues D.F., Gilichinsky D., Tiedje J., Richardson P.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17290 / JCM 13490 / 255-15.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001022 Genomic DNA. Translation: ACB59520.1.
RefSeqYP_001812537.1. NC_010556.1.

3D structure databases

ProteinModelPortalB1YGN7.
SMRB1YGN7. Positions 2-252.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1YGN7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6173172.
GenomeReviewsGene locus Exig_0033 in contig CP001022_GR.
KEGGesi:Exig_0033.
PATRIC32133529. VBIExiSib53410_0042.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG629833.
OMALPLVIHT.
ProtClustDBCLSK872601.

Family and domain databases

InterProIPR012278. DNase_TatD.
IPR018228. DNase_TatD-rel_CS.
IPR015991. DNase_TatD_bac-type.
IPR001130. TatD_superfamily.
[Graphical view]
KOK03424.
PANTHERPTHR10060. TatD_DNase. 1 hit.
PfamPF01026. TatD_DNase. 1 hit.
[Graphical view]
PIRSFPIRSF005902. DNase_TatD. 1 hit.
TIGRFAMsTIGR00010. TIGR00010. 1 hit.
PROSITEPS01137. TATD_1. 1 hit.
PS01090. TATD_2. 1 hit.
PS01091. TATD_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1YGN7_EXIS2
AccessionPrimary (citable) accession number: B1YGN7
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: January 25, 2012
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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