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Protein

Phosphoglycolate phosphatase

Gene

Tneu_0866

Organism
Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta) (Thermoproteus neutrophilus)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalyzes the dephosphorylation of 2-phosphoglycolate.UniRule annotation

Catalytic activityi

2-phosphoglycolate + H2O = glycolate + phosphate.UniRule annotation

Cofactori

Mg2+UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei9NucleophileUniRule annotation1
Metal bindingi9MagnesiumUniRule annotation1
Metal bindingi11MagnesiumUniRule annotation1
Binding sitei151SubstrateUniRule annotation1
Metal bindingi174MagnesiumUniRule annotation1
Metal bindingi178MagnesiumUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Carbohydrate metabolism

Keywords - Ligandi

Magnesium, Metal-binding

Enzyme and pathway databases

BioCyciPNEU444157:G12XQ-854-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoglycolate phosphataseUniRule annotation (EC:3.1.3.18UniRule annotation)
Short name:
PGPUniRule annotation
Short name:
PGPaseUniRule annotation
Gene namesi
Ordered Locus Names:Tneu_0866
OrganismiPyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta) (Thermoproteus neutrophilus)
Taxonomic identifieri444157 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiThermoprotealesThermoproteaceaePyrobaculum
Proteomesi
  • UP000001694 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001456301 – 228Phosphoglycolate phosphataseAdd BLAST228

Interactioni

Protein-protein interaction databases

STRINGi444157.Tneu_0866.

Structurei

3D structure databases

ProteinModelPortaliB1YDE0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the archaeal SPP-like hydrolase family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01213. Archaea.
COG0561. LUCA.
HOGENOMiHOG000184780.
OMAiGYAIHVR.

Family and domain databases

Gene3Di3.40.50.1000. 2 hits.
HAMAPiMF_01419. GPH_hydrolase_arch. 1 hit.
InterProiIPR023214. HAD-like_dom.
IPR006382. PGPase.
[Graphical view]
PfamiPF08282. Hydrolase_3. 2 hits.
[Graphical view]
SUPFAMiSSF56784. SSF56784. 1 hit.

Sequencei

Sequence statusi: Complete.

B1YDE0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGCKVLVVDL DGTLTLSRNT YELSVEALLA LRRARDAGIR VVLATANGLD
60 70 80 90 100
FALTVARYLG VRDVIAENGC LVHIDGETHE LCSGDMSEVD RAVLATGAVA
110 120 130 140 150
PSHQNKCRRF DLAYVPLVEN AVERVKAAVR PGYVVDSSGY AIHVRPAGAD
160 170 180 190 200
KGAAVRWLCE RLGVSCGWVA AVGDSDVDAG MLATAWGIAV GNATEAAKRA
210 220
ARAVVRGPSG LGFKEAVDLI LSGGACAP
Length:228
Mass (Da):23,743
Last modified:May 20, 2008 - v1
Checksum:i80DE9ADD1859A964
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001014 Genomic DNA. Translation: ACB39803.1.

Genome annotation databases

EnsemblBacteriaiACB39803; ACB39803; Tneu_0866.
KEGGitne:Tneu_0866.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001014 Genomic DNA. Translation: ACB39803.1.

3D structure databases

ProteinModelPortaliB1YDE0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi444157.Tneu_0866.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB39803; ACB39803; Tneu_0866.
KEGGitne:Tneu_0866.

Phylogenomic databases

eggNOGiarCOG01213. Archaea.
COG0561. LUCA.
HOGENOMiHOG000184780.
OMAiGYAIHVR.

Enzyme and pathway databases

BioCyciPNEU444157:G12XQ-854-MONOMER.

Family and domain databases

Gene3Di3.40.50.1000. 2 hits.
HAMAPiMF_01419. GPH_hydrolase_arch. 1 hit.
InterProiIPR023214. HAD-like_dom.
IPR006382. PGPase.
[Graphical view]
PfamiPF08282. Hydrolase_3. 2 hits.
[Graphical view]
SUPFAMiSSF56784. SSF56784. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiPGP_PYRNV
AccessioniPrimary (citable) accession number: B1YDE0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: May 20, 2008
Last modified: November 2, 2016
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.