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Unreviewed, UniProtKB/TrEMBL B1Y8K9 (B1Y8K9_THENV)

Last modified March 2, 2010. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
WD-40 repeat protein EMBL ACB40088.1
Gene names
Ordered Locus Names:Tneu_1159
OrganismThermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) [Complete proteome] [HAMAP]
Taxonomic identifier444157 [NCBI]
Taxonomic lineageArchaea › Crenarchaeota › Thermoprotei › Thermoproteales › Thermoproteaceae › Thermoproteus

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Protein attributes

Sequence length333 AA.
Sequence statusComplete.
Protein existencePredicted.

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Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

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Sequences

Sequence LengthMass (Da)Tools
B1Y8K9-1 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: D78FF0262749BA16

FASTA33337,581
        10         20         30         40         50         60 
MKLALKWKTG VGYIKHLQWN PKGGILAVVY RPLEMSKDKN SKDLLVFFHT SGISLWRLKS 

        70         80         90        100        110        120 
TSFDALAFSP DGSLIAVAAY NYEKSTVTIR DIEGREKKLR DYEEEEYKLE VYTITEKSLQ 

       130        140        150        160        170        180 
RKNTFKIASN IRSIALSSDY IMAIVTEDNV VSFWNIKKNF AEELWRWRVD TQASITNQGT 

       190        200        210        220        230        240 
PLVRFNPVNA NLVAVSTSNG EIIFVDLNSR TIHRHVSATK FVEWSPDGKL LLVSGNGILR 

       250        260        270        280        290        300 
VYDDQARLLD SVPADGESAT WISNDTILVA GSTISTYSIK EGKLKPLDQE LDTLKCECFD 

       310        320        330 
GIMHMSYSAP DNMLALVFKL GNVSRLCTYN III

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References

[1]"Complete sequence of Thermoproteus neutrophilus V24Sta."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Mikhailova N., Biddle J.F., Zhang Z., Fitz-Gibbon S.T., Lowe T.M., Saltikov C., House C.H., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001014 Genomic DNA. Translation: ACB40088.1.
RefSeqYP_001794534.1.

3D structure databases

SMRB1Y8K9. Positions 11-314, 62-326.
ModBaseSearch...

Genome annotation databases

GeneID6166129.
GenomeReviewsGene locus Tneu_1159 in contig CP001014_GR.
KEGGtne:Tneu_1159.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG726356.
ProtClustDBCLSK2335218.

Family and domain databases

InterProIPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR011046. WD40_repeat-like_dom.
IPR019781. WD40_repeat_sg.
[Graphical view]
Gene3DG3DSA:2.130.10.10. WD40/YVTN_repeat-like. 1 hit.
PfamPF00400. WD40. 1 hit.
[Graphical view]
SMARTSM00320. WD40. 3 hits.
[Graphical view]
SUPFAMSSF50978. WD40_like. 1 hit.
ProtoNetSearch...

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Entry information

Entry nameB1Y8K9_THENV
AccessionPrimary (citable) accession number: B1Y8K9
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: March 2, 2010
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information