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B1Y6Z9 (B1Y6Z9_LEPCP) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length473 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 FAD-binding PCMH-type domain. SAAS SAAS016167

Sequences

Sequence LengthMass (Da)Tools
B1Y6Z9 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: B9A9851474E9546B

FASTA47350,940
        10         20         30         40         50         60 
MNAPHSHDWQ PAIRPRPMPA AMREQLQQRF GSRLSTAQAV RDQHGRDESP YDTAAPEAVL 

        70         80         90        100        110        120 
FCESNEDVAA AVAIAHEHAV PVIPFGVGSS LEGHLLAVQG GLSLDLSRMN RILSLNPEDL 

       130        140        150        160        170        180 
TVTVQAGVTR MQLNNEIRHS GLFFPIDPGA DATLGGMSAT RASGTNAVRY GTMRENVLAL 

       190        200        210        220        230        240 
TVVTASGELV HTGTRARKSS AGYDLTRLFV GSEGTLGVMT EITLKLYPLP EAVLAAICHF 

       250        260        270        280        290        300 
PSIAAAVDTT IGLIQMGVPI ARCELIDART VGMVNRHNKL DLREQDMLLM EFHGSPASVR 

       310        320        330        340        350        360 
EQAETVQALA AENGGESFEW AETPEERTRL WTARHHAYFA AVQSRPGCRA ISTDTCVPIS 

       370        380        390        400        410        420 
RLAECIVDTV ADVDACGLPY FLVGHVGDGN FHIGFLIDPD SPDEGRIAEQ VNRTLVARAL 

       430        440        450        460        470 
QMAGTCTGEH GIGLHKMGFL LDEAGPGAVA LMRQIKHALD PKNIMNPGKI FAW

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References

[1]"Complete sequence of Leptothrix cholodnii SP-6."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Lykidis A., Emerson D., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51168 / LMG 8142 / SP-6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001013 Genomic DNA. Translation: ACB32477.1.
RefSeqYP_001789242.1. NC_010524.1.

3D structure databases

ProteinModelPortalB1Y6Z9.
ModBaseSearch...

Protein-protein interaction databases

STRING395495.Lcho_0202.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB32477; ACB32477; Lcho_0202.
GeneID6161411.
KEGGlch:Lcho_0202.
PATRIC22390673. VBILepCho83238_0206.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0277.
HOGENOMHOG000230995.
KOK00102.
OMAASYRIMA.
ProtClustDBCLSK2487653.

Enzyme and pathway databases

BioCycLCHO395495:GHYL-202-MONOMER.

Family and domain databases

Gene3D1.10.45.10. 1 hit.
3.30.43.10. 1 hit.
3.30.465.10. 1 hit.
InterProIPR016169. CO_DH_flavot_FAD-bd_sub2.
IPR016166. FAD-bd_2.
IPR016167. FAD-bd_2_sub1.
IPR016164. FAD-linked_Oxase-like_C.
IPR004113. FAD-linked_oxidase_C.
IPR006094. Oxid_FAD_bind_N.
IPR016171. Vanillyl_alc_oxidase_C-sub2.
[Graphical view]
PfamPF02913. FAD-oxidase_C. 1 hit.
PF01565. FAD_binding_4. 1 hit.
[Graphical view]
SUPFAMSSF55103. FAD-binding_2. 1 hit.
SSF56176. FAD-binding_2. 1 hit.
PROSITEPS51387. FAD_PCMH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1Y6Z9_LEPCP
AccessionPrimary (citable) accession number: B1Y6Z9
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: May 1, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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