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B1Y6Y9 (B1Y6Y9_LEPCP) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length268 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processintein-mediated protein splicing

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1Y6Y9 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: EFA31C1BF5207518

FASTA26828,975
        10         20         30         40         50         60 
MDRSSTSPVS FEFYSVTDRG RARANNEDSV AIDDAAALAV LADGMGGYNA GEVASGMATA 

        70         80         90        100        110        120 
FIRSELGRWL TEASEEVTDQ DARRAMDVCV DNANRAIFNA ANSNPQYAGM GTTLVVAVFR 

       130        140        150        160        170        180 
GARLLLGHIG DSRAYRWREG RLVQLTRDHS LLQEQIDAGL ISPEQAAMSL NKNLVTRAVG 

       190        200        210        220        230        240 
VEDIVLLETH QHSVSPDDWI LMCSDGLSDM LDDESIAEVL MSHNQVADAA HALVEAANEA 

       250        260 
GGRDNIAVIL VAVRAEASAG RTWWPFRR 

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References

[1]"Complete sequence of Leptothrix cholodnii SP-6."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Lykidis A., Emerson D., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51168 / LMG 8142 / SP-6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001013 Genomic DNA. Translation: ACB32467.1.
RefSeqYP_001789232.1. NC_010524.1.

3D structure databases

ProteinModelPortalB1Y6Y9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING395495.Lcho_0192.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB32467; ACB32467; Lcho_0192.
GeneID6160706.
KEGGlch:Lcho_0192.
PATRIC22390653. VBILepCho83238_0196.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0631.
HOGENOMHOG000235782.
KOK01090.
OMAFFIVADG.
OrthoDBEOG65N17S.
ProtClustDBCLSK722613.

Enzyme and pathway databases

BioCycLCHO395495:GHYL-192-MONOMER.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR006141. Intein_splice_site.
IPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERPTHR13832. PTHR13832. 1 hit.
SMARTSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF81606. SSF81606. 1 hit.
PROSITEPS50817. INTEIN_N_TER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1Y6Y9_LEPCP
AccessionPrimary (citable) accession number: B1Y6Y9
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: November 13, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)