B1Y6S9 (B1Y6S9_LEPCP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Xylulokinase EMBL ACB32407.1

Gene names

Ordered Locus Names:

Lcho_0132

Organism

Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6)) [Complete proteome] [HAMAP] EMBL ACB32407.1

Taxonomic identifier

395495 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › unclassified Burkholderiales › Burkholderiales Genera incertae sedis › Leptothrix › Leptothrix cholodnii

Protein attributes

Sequence length	496 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the FGGY kinase family. RuleBase RU003733

Ontologies

Keywords
Molecular function	Kinase RuleBase RU003733 SAAS SAAS018484 EMBL ACB32407.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	xylulose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	xylulokinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1Y6S9 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: FE6086C1B3AC6821	FASTA	496	52,473
	10 20 30 40 50 60 MYLGIDLGTS EVKFLLLDAA HHIVASVGEP LAVQRPQPLW SEQNPAHWWA ATDRALTRLA 70 80 90 100 110 120 AEQPQAMRAV RAIGLSGQMH GAVLQDARGE VLRPAILWND GRSGAECAEL EAALPTLHAI 130 140 150 160 170 180 TGNLAMPGFT APKLLWVKQH EPELFARMRR VLLPKDWLRE QLTGEAVSEM SDASGTLWLD 190 200 210 220 230 240 VAQRRWSAEV LAACGMDESQ MPRLVEGSEV SGTLKPALAA RWGLTAGIPV AGGGGDNAAS 250 260 270 280 290 300 AVGIGAVRPG EGFVSLGTSG VIFLASDRFR PNPAHAMHAF CHALPGRWHQ MSVMLSAANG 310 320 330 340 350 360 LRWVKNLLGA HSEAALLDTV AALTPLQRAQ APVFLPYLNG ERTPHNNPHA QGVFFGLNNE 370 380 390 400 410 420 HDAAALAYAV VEGVTFGLLD GWHSLGTAPG EVQSLSLVGG GARSALWAQL LADAIGVPMV 430 440 450 460 470 480 TRQGGEAGGA LGAARLAWLA DGARIEDVCL APPVAAVFEP DAARAAQLLP RHRRFRRLYA 490 ALREEFSATS ATGAAG

References

[1]

"Complete sequence of Leptothrix cholodnii SP-6." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Lykidis A., Emerson D., Richardson P. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51168 / LMG 8142 / SP-6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001013 Genomic DNA. Translation: ACB32407.1.
RefSeq	YP_001789172.1. NC_010524.1.
3D structure databases
ProteinModelPortal	B1Y6S9.
ModBase	Search...
Protein-protein interaction databases
STRING	395495.Lcho_0132.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACB32407; ACB32407; Lcho_0132.
GeneID	6161260.
KEGG	lch:Lcho_0132.
PATRIC	22390533. VBILepCho83238_0136.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1070.
HOGENOM	HOG000222138.
KO	K00854.
OMA	MHAFCHA.
ProtClustDB	CLSK2506980.
Enzyme and pathway databases
BioCyc	LCHO395495:GHYL-132-MONOMER.
Family and domain databases
InterPro	IPR018485. Carb_kinase_FGGY_C. IPR018483. Carb_kinase_FGGY_CS. IPR018484. Carb_kinase_FGGY_N. IPR006000. Xylulokinase. [Graphical view]
Pfam	PF02782. FGGY_C. 1 hit. PF00370. FGGY_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR01312. XylB. 1 hit.
PROSITE	PS00933. FGGY_KINASES_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1Y6S9_LEPCP

Accession

Primary (citable) accession number: B1Y6S9

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	May 1, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)