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B1Y5X5 (B1Y5X5_LEPCP) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length460 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Keywords
   Molecular functionLyase EMBL ACB36021.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1Y5X5 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 3D9566EA04B0AC18

FASTA46051,010
        10         20         30         40         50         60 
MDQSNRYADL SLREEELIRG GRHILVAYKM KPKPGHGYLE AAAHFAAESS TGTNVEVSTT 

        70         80         90        100        110        120 
DEFTKGVDAL VYLIDEASEE MRIAYPLDLF DRNITDGRMM MVSFLTLAIG NNQGMGDIQH 

       130        140        150        160        170        180 
AKIYDFWMPP RAIQLFDGPS KDISDLWRML GRPLKDGGYI AGTIIKPKLG LRPEPFAEAA 

       190        200        210        220        230        240 
YQFWLGGDFI KNDEPQGNQV FAPMKKTLPL VYDAMKRAMD KTGEAKIFSA NITADDHYEM 

       250        260        270        280        290        300 
LARGEFVLET FGPDADKVAF LVDGYVGGPG MITTARRCFP NQYLHYHRAG HGAVTSPSAK 

       310        320        330        340        350        360 
RGYTAYVLAK MSRLQGASGI HVGTMGYGKM EGEHDDRAIA YIIERDSYTG PAYHQEWYGM 

       370        380        390        400        410        420 
KPTTPIISGG MNALRLPGFF ENLGHGNVIN TAGGGSYGHI DSPADGATSL RQAYECWKAK 

       430        440        450        460 
ADPIEWAKEH REFARAFDSF PKDADGLYPG WRDKLSGVHR 

« Hide

References

[1]"Complete sequence of Leptothrix cholodnii SP-6."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Lykidis A., Emerson D., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51168 / LMG 8142 / SP-6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001013 Genomic DNA. Translation: ACB36021.1.
RefSeqYP_001792786.1. NC_010524.1.

3D structure databases

ProteinModelPortalB1Y5X5.
SMRB1Y5X5. Positions 2-455.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING395495.Lcho_3767.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB36021; ACB36021; Lcho_3767.
GeneID6162954.
KEGGlch:Lcho_3767.
PATRIC22397971. VBILepCho83238_3806.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230831.
KOK01601.
OMANQYLHYH.
OrthoDBEOG66QKT8.
ProtClustDBPRK13475.

Enzyme and pathway databases

BioCycLCHO395495:GHYL-3815-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPMF_01339. RuBisCO_L_type2.
InterProIPR020871. RuBisCO.
IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1Y5X5_LEPCP
AccessionPrimary (citable) accession number: B1Y5X5
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: February 19, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)