B1Y5J5 (B1Y5J5_LEPCP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Three-deoxy-D-manno-octulosonic-acid transferase domain protein EMBL ACB34707.1

Gene names

Ordered Locus Names:

Lcho_2442

Organism

Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6)) [Complete proteome] [HAMAP] EMBL ACB34707.1

Taxonomic identifier

395495 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Leptothrix

Protein attributes

Sequence length	438 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Transferase EMBL ACB34707.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	sugar binding Inferred from electronic annotation. Source: InterPro transferase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1Y5J5 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: B5C50767E5416DF0	FASTA	438	46,565
	10 20 30 40 50 60 MIALKRGLAR LAYSTLLRGL TPLLLARLFW RARREPPYGQ AIGERLGFGA PTKPGALWLH 70 80 90 100 110 120 AVSLGETRAA EPLIQALRAA RPGLRLLLTH GTATGRETGA ALLRAGDAQR WLPFDTPGAV 130 140 150 160 170 180 RRFLRRHRPA IGVLMETEVW PNLQAEALAA GVPMVLANAR LSDKSLRKSL RLDALMRPAV 190 200 210 220 230 240 EALSTALAQT EDDARRLREA GARDVQVCGN IKFDLRPDPA LLTRGRHWRV AAAGRPIVLA 250 260 270 280 290 300 ASWREGEDEP LLQAWAAMLA QSDPSARRPV LALVPRHPQR FDEVAALVQA AGLTLSRRSS 310 320 330 340 350 360 WGEGDAAVPD AAAQADVWLG DSMREMPAYY ALADVALLGG SFAPLGGQNL IEAAACGCPV 370 380 390 400 410 420 VMGPHTFNFA DAAQLAEAQS AARRVPAIGN GVALAVAQAG DVSAHAQASA AALAYAAAHQ 430 GASERMAAIL LKQARWPG

References

[1]

"Complete sequence of Leptothrix cholodnii SP-6." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Lykidis A., Emerson D., Richardson P. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51168 / LMG 8142 / SP-6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001013 Genomic DNA. Translation: ACB34707.1.
RefSeq	YP_001791472.1. NC_010524.1.
3D structure databases
ProteinModelPortal	B1Y5J5.
ModBase	Search...
Protein-protein interaction databases
STRING	B1Y5J5.
Protein family/group databases
CAZy	GT30. Glycosyltransferase Family 30.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6161862.
GenomeReviews	Gene locus Lcho_2442 in contig CP001013_GR.
KEGG	lch:Lcho_2442.
PATRIC	22395253. VBILepCho83238_2460.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG664037.
OMA	HPQRFDE.
ProtClustDB	CLSK2322041.
Family and domain databases
InterPro	IPR007507. Glycos_transf_N. [Graphical view]
KO	K02527.
Pfam	PF04413. Glycos_transf_N. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1Y5J5_LEPCP

Accession

Primary (citable) accession number: B1Y5J5

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)