B1Y4Z8 (B1Y4Z8_LEPCP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL ACB35894.1

Gene names

Ordered Locus Names:

Lcho_3640

Organism

Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6)) [Complete proteome] [HAMAP] EMBL ACB35894.1

Taxonomic identifier

395495 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Leptothrix

Protein attributes

Sequence length	441 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ACB35894.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	flavin adenine dinucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 20	20	Potential EMBL ACB35894.1
	Chain	21 – 441	421	Potential EMBL ACB35894.1		PRO_5000331752

Sequences

	Sequence		Length	Mass (Da)
	B1Y4Z8 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 0731BAF19B6B76A4	FASTA	441	48,405
	10 20 30 40 50 60 MEIAILFALI LLNGLFAMSE IALVTARKVR LQKLIDEGDR SAEAAVKLGE DPTRFLSTIQ 70 80 90 100 110 120 IGITSIGVLN GIVGEAALAK PLALWLESLG LSQLYSTYAA TGLVVVLITY FSIVVGELVP 130 140 150 160 170 180 KRVGQTHPET LARLVARPIN WLAIGTKPFV RLLSVSTHAL LRLLGVKDNG GSAVTEEEIH 190 200 210 220 230 240 AMLAEGTNAG VIESHEHAMV RNVFRLDDRQ IGSLMVPRGD VTFLDVDLPF EQNLARIEQA 250 260 270 280 290 300 DHARFPVVKG GSLDNVLGVV NARQWLSRSL RLDDRNLAEQ PLQHPLYVPE TLTGMELLDN 310 320 330 340 350 360 FRLSDVHIAF VIDEYGEVQG IVTLQDLIEA ITGEFRPRDP ETSWAVQRDD GSWLLDGHIP 370 380 390 400 410 420 VPELKDRLGL DSVPEEDRGR YHTLSGMLML LTGRLPKVAD TASWEGWRLE IVDMDGKTID 430 440 KVLASRIPEE AATDGSEVST G

References

[1]

"Complete sequence of Leptothrix cholodnii SP-6." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Lykidis A., Emerson D., Richardson P. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51168 / LMG 8142 / SP-6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001013 Genomic DNA. Translation: ACB35894.1.
RefSeq	YP_001792659.1. NC_010524.1.
3D structure databases
ProteinModelPortal	B1Y4Z8.
SMR	B1Y4Z8. Positions 343-427.
ModBase	Search...
Protein-protein interaction databases
STRING	B1Y4Z8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6163175.
GenomeReviews	Gene locus Lcho_3640 in contig CP001013_GR.
KEGG	lch:Lcho_3640.
PATRIC	22397711. VBILepCho83238_3676.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG673071.
OMA	AFAMSEI.
ProtClustDB	CLSK963324.
Family and domain databases
InterPro	IPR016169. CO_DH_flavot_FAD-bd_sub2. IPR000644. Cysta_beta_synth_core. IPR002550. DUF21. IPR005170. Transptr-assoc_dom. [Graphical view]
Gene3D	G3DSA:3.30.465.10. CO_DH_flavoprot_FAD-bd_sub2. 1 hit.
KO	K03699.
Pfam	PF00571. CBS. 2 hits. PF03471. CorC_HlyC. 1 hit. PF01595. DUF21. 1 hit. [Graphical view]
SMART	SM00116. CBS. 2 hits. SM01091. CorC_HlyC. 1 hit. [Graphical view]
PROSITE	PS51371. CBS. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1Y4Z8_LEPCP

Accession

Primary (citable) accession number: B1Y4Z8

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	January 25, 2012
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)