B1Y4T2 (B1Y4T2_LEPCP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
D-amino-acid dehydrogenase EMBL ACB34645.1
EC=1.4.99.1 EMBL ACB34645.1

Gene names

Ordered Locus Names:

Lcho_2380

Organism

Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6)) [Complete proteome] [HAMAP] EMBL ACB34645.1

Taxonomic identifier

395495 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Leptothrix

Protein attributes

Sequence length	428 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ACB34645.1
Molecular function	Oxidoreductase EMBL ACB34645.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	D-amino-acid dehydrogenase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 24	24	Potential EMBL ACB34645.1
	Chain	25 – 428	404	Potential EMBL ACB34645.1		PRO_5000331738

Sequences

	Sequence		Length	Mass (Da)
	B1Y4T2 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 89686A8A5545C684	FASTA	428	46,867
	10 20 30 40 50 60 MKVLVLGAGL LGVTSAYFLR QQGHDVTVVD RQATPASETS FANGGQISVS HAEPWANPSA 70 80 90 100 110 120 PLKVLQWLGK EDAPLLFRLR ADARQWRWVL QFLRECTPGR TRHNIEQIVK LGTYSRDTLQ 130 140 150 160 170 180 QLRRDIGVAY DERTQGILHF YTSQKEFDGA EAPAAQMREL GCDRRVISAD EAVRIEPALA 190 200 210 220 230 240 AIRAQLAGAT YTAEDESGDA NRFARELVKH CQADGVQFLM SHTVTALREV GGQIDHVEAT 250 260 270 280 290 300 DAEGRFQRLR ADAYVLAMGS LSPLYARPLG IELPIYPAKG YSVTMPVKDA AKAHQVSLTD 310 320 330 340 350 360 DEYKLVFSRL TTPGVDGQPG TDRLRIAGTA ELNGYDRDLN RVRCEAIVRR TEELFPGAGD 370 380 390 400 410 420 TAQAQFWTGL RPATPSNVPI IGRSKLRNLF LNTGHGTLGW THSCGSGKSI ARIVSGLAPE IDFAFAGA

References

[1]

"Complete sequence of Leptothrix cholodnii SP-6." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Lykidis A., Emerson D., Richardson P. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51168 / LMG 8142 / SP-6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001013 Genomic DNA. Translation: ACB34645.1.
RefSeq	YP_001791410.1. NC_010524.1.
3D structure databases
ProteinModelPortal	B1Y4T2.
ModBase	Search...
Protein-protein interaction databases
STRING	B1Y4T2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6159934.
GenomeReviews	Gene locus Lcho_2380 in contig CP001013_GR.
KEGG	lch:Lcho_2380.
PATRIC	22395125. VBILepCho83238_2397.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG729204.
OMA	WANPGAP.
ProtClustDB	CLSK963413.
Family and domain databases
InterPro	IPR006076. FAD-dep_OxRdtase. [Graphical view]
KO	K00285.
Pfam	PF01266. DAO. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1Y4T2_LEPCP

Accession

Primary (citable) accession number: B1Y4T2

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)