B1Y404 (B1Y404_LEPCP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
N-acetylmuramoyl-L-alanine amidase EMBL ACB33398.1
EC=3.5.1.28 EMBL ACB33398.1

Gene names

Ordered Locus Names:

Lcho_1129

Organism

Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6)) [Complete proteome] [HAMAP] EMBL ACB33398.1

Taxonomic identifier

395495 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Leptothrix

Protein attributes

Sequence length	523 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ACB33398.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	N-acetylmuramoyl-L-alanine amidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1Y404 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 3681AD50BBDFB656	FASTA	523	56,725
	10 20 30 40 50 60 MKYDATRHGH LPAPLSTPPT DDLPAMHRRG WFRQAGAWVL MLGAPDLVRG ANLVAVRVWP 70 80 90 100 110 120 AADYTRVTIE SDQALVTRHF AIDQPPRLAI DIDDLELSPQ LRDLVAKVGN HDPHIEKVRL 130 140 150 160 170 180 GQSEPRKVRM VFDLKSPSEP QVFTLAPIPP YRHRLVFDLR PSKPPDPLLL LVRERETALG 190 200 210 220 230 240 NASQAANHEA EQAASDVDDA LGEFIGRIDS PGATPPPALP GQPGDGPAVA RTPEAVEPDR 250 260 270 280 290 300 PAWPPASAPT PGPAQAPVPA TASAPPSAPA APVRPPAVPP GRAGINRLVI VAIDPGHGGE 310 320 330 340 350 360 DPGAIGPSGL REKDVVLQIA RQLHDLINTR PGMRAMLTRD ADFFVPLQDR VRKAQRVQAD 370 380 390 400 410 420 LFISVHADAF MLPRARGASV FALSERSASS AAARWMAQRE NRADAIGGIN INVKANDRHV 430 440 450 460 470 480 LRALFDMSTS AQIKDSLRIG REVLGHIGQV GKLHKNHVEQ AGFAVLKAPD IPSILVETGF 490 500 510 520 ITNPEEERQL RSPAYQARLV KALYTGVVRY FARNPPLARN RML

References

[1]

"Complete sequence of Leptothrix cholodnii SP-6." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Lykidis A., Emerson D., Richardson P. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51168 / LMG 8142 / SP-6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001013 Genomic DNA. Translation: ACB33398.1.
RefSeq	YP_001790163.1. NC_010524.1.
3D structure databases
ProteinModelPortal	B1Y404.
ModBase	Search...
Protein-protein interaction databases
STRING	B1Y404.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6163743.
GenomeReviews	Gene locus Lcho_1129 in contig CP001013_GR.
KEGG	lch:Lcho_1129.
PATRIC	22392551. VBILepCho83238_1129.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG656726.
OMA	VWPAEDY.
Family and domain databases
InterPro	IPR021731. AMIN. IPR002508. CW_Hdrlase/autolysin_cat. [Graphical view]
Gene3D	G3DSA:3.40.630.40. Cell_wall_OHase/autolysin_cat. 2 hits.
KO	K01448.
Pfam	PF01520. Amidase_3. 1 hit. PF11741. AMIN. 1 hit. [Graphical view]
SMART	SM00646. Ami_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1Y404_LEPCP

Accession

Primary (citable) accession number: B1Y404

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)