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Protein
Submitted name:

Flagellar hook-associated 2 domain protein

Gene

Lcho_1011

Organism
Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciLCHO395495:GHYL-1022-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Flagellar hook-associated 2 domain proteinImported
Gene namesi
Ordered Locus Names:Lcho_1011Imported
OrganismiLeptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6))Imported
Taxonomic identifieri395495 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesLeptothrix
ProteomesiUP000001693 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell projection, Cilium, FlagellumImported

Interactioni

Protein-protein interaction databases

STRINGi395495.Lcho_1011.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1345.
HOGENOMiHOG000254632.
KOiK02407.
OMAiVTKYVKV.
OrthoDBiEOG6GN6X6.

Family and domain databases

InterProiIPR010810. Flagellin_hook_IN_motif.
IPR010809. FliD_C.
IPR003481. FliD_N.
[Graphical view]
PfamiPF07196. Flagellin_IN. 1 hit.
PF07195. FliD_C. 1 hit.
PF02465. FliD_N. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1Y379-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASISSAGIG SGLDVSSIVT QLMAVEKSPL QQMQTEASKI QSKLSAYGKV
60 70 80 90 100
QSYVSALRDA ALNLTKSDTW GSTTASSGDA SVFTATTASG ATAGNYSLTV
110 120 130 140 150
QQMASAQTVA SAAWPASVST VGSGVLRLEL GTWAAGQTGF TPKSGTSSVD
160 170 180 190 200
VTVAASDTLA DVRDKINAAK SGVMASIVND TSGSRLVLRS SETGAENAFR
210 220 230 240 250
VTATDDDGNN TDASGLSALA FDPSAGANAM VQSQAAVNAR ATINGLSVSS
260 270 280 290 300
ASNLLTDVVD GVTIKLGKVS STPVDLSVSS NTESVKTAVT AFADAYNNLS
310 320 330 340 350
KYLAEQTKYN AAAKSGATLQ GDSGTNALRS AMRNIIGGTS GVTGAFNRLA
360 370 380 390 400
QVGLDPQSDG TLKVDSTKLT SSLGKLADLK ALFANKDAGN EANNGFAVSL
410 420 430 440 450
QKWGDSLLSF DGSLSTRSSS LQRQIDANAK KQEDFNERMT GVEARIRAQY
460 470
TALDTQMAKL NGLSTYMTQQ ITNMNKSSS
Length:479
Mass (Da):49,125
Last modified:May 20, 2008 - v1
Checksum:iF11E857B7FA91D05
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001013 Genomic DNA. Translation: ACB33282.1.
RefSeqiWP_012346044.1. NC_010524.1.
YP_001790047.1. NC_010524.1.

Genome annotation databases

EnsemblBacteriaiACB33282; ACB33282; Lcho_1011.
KEGGilch:Lcho_1011.
PATRICi22392301. VBILepCho83238_1010.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001013 Genomic DNA. Translation: ACB33282.1.
RefSeqiWP_012346044.1. NC_010524.1.
YP_001790047.1. NC_010524.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi395495.Lcho_1011.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB33282; ACB33282; Lcho_1011.
KEGGilch:Lcho_1011.
PATRICi22392301. VBILepCho83238_1010.

Phylogenomic databases

eggNOGiCOG1345.
HOGENOMiHOG000254632.
KOiK02407.
OMAiVTKYVKV.
OrthoDBiEOG6GN6X6.

Enzyme and pathway databases

BioCyciLCHO395495:GHYL-1022-MONOMER.

Family and domain databases

InterProiIPR010810. Flagellin_hook_IN_motif.
IPR010809. FliD_C.
IPR003481. FliD_N.
[Graphical view]
PfamiPF07196. Flagellin_IN. 1 hit.
PF07195. FliD_C. 1 hit.
PF02465. FliD_N. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51168 / LMG 8142 / SP-6Imported.

Entry informationi

Entry nameiB1Y379_LEPCP
AccessioniPrimary (citable) accession number: B1Y379
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: May 27, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.