Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Flagellar hook-associated protein 2

Gene

Lcho_1011

Organism
Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6))
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.UniRule annotation

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciLCHO395495:GHYL-1022-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Flagellar hook-associated protein 2UniRule annotation
Short name:
HAP2UniRule annotation
Alternative name(s):
Flagellar cap proteinUniRule annotation
Gene namesi
Ordered Locus Names:Lcho_1011Imported
OrganismiLeptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6))Imported
Taxonomic identifieri395495 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesLeptothrix
Proteomesi
  • UP000001693 Componenti: Chromosome

Subcellular locationi

  • Secreted UniRule annotation
  • Bacterial flagellum UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Bacterial flagellumUniRule annotation, Cell projection, Cilium, FlagellumImported, SecretedUniRule annotation

Interactioni

Subunit structurei

Homopentamer.UniRule annotation

Protein-protein interaction databases

STRINGi395495.Lcho_1011.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini11 – 10797FliD_NInterPro annotationAdd
BLAST
Domaini236 – 461226FliD_CInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the FliD family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105DTS. Bacteria.
COG1345. LUCA.
HOGENOMiHOG000254632.
KOiK02407.
OMAiVTKYVKV.
OrthoDBiEOG6GN6X6.

Family and domain databases

InterProiIPR010810. Flagellin_hook_IN_motif.
IPR010809. FliD_C.
IPR003481. FliD_N.
[Graphical view]
PfamiPF07196. Flagellin_IN. 1 hit.
PF07195. FliD_C. 1 hit.
PF02465. FliD_N. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1Y379-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASISSAGIG SGLDVSSIVT QLMAVEKSPL QQMQTEASKI QSKLSAYGKV
60 70 80 90 100
QSYVSALRDA ALNLTKSDTW GSTTASSGDA SVFTATTASG ATAGNYSLTV
110 120 130 140 150
QQMASAQTVA SAAWPASVST VGSGVLRLEL GTWAAGQTGF TPKSGTSSVD
160 170 180 190 200
VTVAASDTLA DVRDKINAAK SGVMASIVND TSGSRLVLRS SETGAENAFR
210 220 230 240 250
VTATDDDGNN TDASGLSALA FDPSAGANAM VQSQAAVNAR ATINGLSVSS
260 270 280 290 300
ASNLLTDVVD GVTIKLGKVS STPVDLSVSS NTESVKTAVT AFADAYNNLS
310 320 330 340 350
KYLAEQTKYN AAAKSGATLQ GDSGTNALRS AMRNIIGGTS GVTGAFNRLA
360 370 380 390 400
QVGLDPQSDG TLKVDSTKLT SSLGKLADLK ALFANKDAGN EANNGFAVSL
410 420 430 440 450
QKWGDSLLSF DGSLSTRSSS LQRQIDANAK KQEDFNERMT GVEARIRAQY
460 470
TALDTQMAKL NGLSTYMTQQ ITNMNKSSS
Length:479
Mass (Da):49,125
Last modified:May 20, 2008 - v1
Checksum:iF11E857B7FA91D05
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001013 Genomic DNA. Translation: ACB33282.1.
RefSeqiWP_012346044.1. NC_010524.1.

Genome annotation databases

EnsemblBacteriaiACB33282; ACB33282; Lcho_1011.
KEGGilch:Lcho_1011.
PATRICi22392301. VBILepCho83238_1010.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001013 Genomic DNA. Translation: ACB33282.1.
RefSeqiWP_012346044.1. NC_010524.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi395495.Lcho_1011.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB33282; ACB33282; Lcho_1011.
KEGGilch:Lcho_1011.
PATRICi22392301. VBILepCho83238_1010.

Phylogenomic databases

eggNOGiENOG4105DTS. Bacteria.
COG1345. LUCA.
HOGENOMiHOG000254632.
KOiK02407.
OMAiVTKYVKV.
OrthoDBiEOG6GN6X6.

Enzyme and pathway databases

BioCyciLCHO395495:GHYL-1022-MONOMER.

Family and domain databases

InterProiIPR010810. Flagellin_hook_IN_motif.
IPR010809. FliD_C.
IPR003481. FliD_N.
[Graphical view]
PfamiPF07196. Flagellin_IN. 1 hit.
PF07195. FliD_C. 1 hit.
PF02465. FliD_N. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51168 / LMG 8142 / SP-6Imported.

Entry informationi

Entry nameiB1Y379_LEPCP
AccessioniPrimary (citable) accession number: B1Y379
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: March 16, 2016
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.