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B1Y379 (B1Y379_LEPCP) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length479 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
B1Y379 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: F11E857B7FA91D05

FASTA47949,125
        10         20         30         40         50         60 
MASISSAGIG SGLDVSSIVT QLMAVEKSPL QQMQTEASKI QSKLSAYGKV QSYVSALRDA 

        70         80         90        100        110        120 
ALNLTKSDTW GSTTASSGDA SVFTATTASG ATAGNYSLTV QQMASAQTVA SAAWPASVST 

       130        140        150        160        170        180 
VGSGVLRLEL GTWAAGQTGF TPKSGTSSVD VTVAASDTLA DVRDKINAAK SGVMASIVND 

       190        200        210        220        230        240 
TSGSRLVLRS SETGAENAFR VTATDDDGNN TDASGLSALA FDPSAGANAM VQSQAAVNAR 

       250        260        270        280        290        300 
ATINGLSVSS ASNLLTDVVD GVTIKLGKVS STPVDLSVSS NTESVKTAVT AFADAYNNLS 

       310        320        330        340        350        360 
KYLAEQTKYN AAAKSGATLQ GDSGTNALRS AMRNIIGGTS GVTGAFNRLA QVGLDPQSDG 

       370        380        390        400        410        420 
TLKVDSTKLT SSLGKLADLK ALFANKDAGN EANNGFAVSL QKWGDSLLSF DGSLSTRSSS 

       430        440        450        460        470 
LQRQIDANAK KQEDFNERMT GVEARIRAQY TALDTQMAKL NGLSTYMTQQ ITNMNKSSS 

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References

[1]"Complete sequence of Leptothrix cholodnii SP-6."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Lykidis A., Emerson D., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51168 / LMG 8142 / SP-6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001013 Genomic DNA. Translation: ACB33282.1.
RefSeqYP_001790047.1. NC_010524.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING395495.Lcho_1011.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB33282; ACB33282; Lcho_1011.
GeneID6160136.
KEGGlch:Lcho_1011.
PATRIC22392301. VBILepCho83238_1010.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1345.
HOGENOMHOG000254632.
KOK02407.
OMAANKMTIS.
OrthoDBEOG6GN6X6.
ProtClustDBCLSK2322117.

Enzyme and pathway databases

BioCycLCHO395495:GHYL-1022-MONOMER.

Family and domain databases

InterProIPR010810. Flagellin_hook_IN_motif.
IPR010809. FliD_C.
IPR003481. FliD_N.
[Graphical view]
PfamPF07196. Flagellin_IN. 1 hit.
PF07195. FliD_C. 1 hit.
PF02465. FliD_N. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1Y379_LEPCP
AccessionPrimary (citable) accession number: B1Y379
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: November 13, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)