B1Y2N8 (B1Y2N8_LEPCP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Riboflavin synthase, alpha subunit EMBL ACB34380.1

Gene names

Ordered Locus Names:

Lcho_2113

Organism

Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6)) [Complete proteome] [HAMAP] EMBL ACB34380.1

Taxonomic identifier

395495 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Leptothrix

Protein attributes

Sequence length	235 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	riboflavin biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	oxidoreductase activity Inferred from electronic annotation. Source: InterPro riboflavin synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1Y2N8 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: FBFCF0CFC596BB47	FASTA	235	25,344
	10 20 30 40 50 60 MFTGIVQAVA TVVAITDRPG LRSFTLEFPP GFIDGQEIGA SVACDGVCLT VTAHHGGQRA 70 80 90 100 110 120 DFDVMQQSLM LTTLGTLEVG SRINVERAAR DGVEIGGHPI SGHVDFQAHV AEVRQPENNH 130 140 150 160 170 180 VLRIAVPQPW MRYVFPKGYI AINGASLTVA EADRKAGWFE VWLIPETLRQ TTFGAKDAGS 190 200 210 220 230 ALNIEIERGT QVMVDTVRDT LEERLGPLLP ALEALLRERG LDVTALGGTP ALLQP

References

[1]

"Complete sequence of Leptothrix cholodnii SP-6." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Lykidis A., Emerson D., Richardson P. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51168 / LMG 8142 / SP-6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001013 Genomic DNA. Translation: ACB34380.1.
RefSeq	YP_001791145.1. NC_010524.1.
3D structure databases
ProteinModelPortal	B1Y2N8.
ModBase	Search...
Protein-protein interaction databases
STRING	B1Y2N8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6162020.
GenomeReviews	Gene locus Lcho_2113 in contig CP001013_GR.
KEGG	lch:Lcho_2113.
PATRIC	22394595. VBILepCho83238_2134.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG289809.
OMA	HILSGHV.
ProtClustDB	PRK09289.
Family and domain databases
InterPro	IPR023366. ATPase_F1/A1-cplx_a_su_N. IPR001783. Lumazine-bd. IPR017938. Riboflavin_synthase-like_b-brl. [Graphical view]
Gene3D	G3DSA:2.40.30.20. G3DSA:2.40.30.20. 2 hits.
KO	K00793.
PANTHER	PTHR21098. Lumazine_bd. 1 hit.
Pfam	PF00677. Lum_binding. 2 hits. [Graphical view]
PIRSF	PIRSF000498. Riboflavin_syn_A. 1 hit.
SUPFAM	SSF63380. Riboflavin_synthase_like_b-brl. 2 hits.
TIGRFAMs	TIGR00187. RibE. 1 hit.
PROSITE	PS51177. LUMAZINE_BIND. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1Y2N8_LEPCP

Accession

Primary (citable) accession number: B1Y2N8

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)