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B1Y1J4 (B1Y1J4_LEPCP) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length409 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionAminotransferase EMBL ACB34293.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processbiosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionpyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

transaminase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1Y1J4 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 7628D69EDC4EF082

FASTA40945,511
        10         20         30         40         50         60 
MLKTVAKSSK LANVCYDIRG PVLEKARQME EEGHKIIKLN IGNLAVFGLE PPDEIVQDMI 

        70         80         90        100        110        120 
RNMPHAAGYT DSKGLFAPRK SVVHYTQEKG VKGVTVDDVY LGNGASELIA MSMNALLDDG 

       130        140        150        160        170        180 
DEVLIPSPDY PLYTAVVALS GGKPVHYMCD EQAEWMPDIA DIRRKITPNT RAIVVINPNN 

       190        200        210        220        230        240 
PTGALYPDSV LLELIEVARQ HQLIIFADEI YDKTLYDGHT HTSIAALADD VLILTFNGLS 

       250        260        270        280        290        300 
KNYRSCGYRA GWMVVSGDKR HARDYIEGLN MLASMRLCAN TPGQLAIQTA LGGYQSIKDL 

       310        320        330        340        350        360 
VVPTGRLCRQ RDLAHKLLSE IPGVTCVKPK AALYMFPRLD PKMYPIADDQ QFAYELLAEE 

       370        380        390        400 
KVLIVQGTGF NWPTPDHFRL VFLPNSDDLT DAVSRIARFL DHYRKRHSA 

« Hide

References

[1]"Complete sequence of Leptothrix cholodnii SP-6."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Lykidis A., Emerson D., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51168 / LMG 8142 / SP-6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001013 Genomic DNA. Translation: ACB34293.1.
RefSeqYP_001791058.1. NC_010524.1.

3D structure databases

ProteinModelPortalB1Y1J4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING395495.Lcho_2026.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB34293; ACB34293; Lcho_2026.
GeneID6163575.
KEGGlch:Lcho_2026.
PATRIC22394411. VBILepCho83238_2042.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0436.
HOGENOMHOG000223042.
KOK14260.
OMAQMEDEGH.
OrthoDBEOG6X9MJ6.

Enzyme and pathway databases

BioCycLCHO395495:GHYL-2060-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1Y1J4_LEPCP
AccessionPrimary (citable) accession number: B1Y1J4
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: May 14, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)