B1Y1J4 (B1Y1J4_LEPCP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Aminotransferase class I and II EMBL ACB34293.1

Gene names

Ordered Locus Names:

Lcho_2026

Organism

Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6)) [Complete proteome] [HAMAP] EMBL ACB34293.1

Taxonomic identifier

395495 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › unclassified Burkholderiales › Burkholderiales Genera incertae sedis › Leptothrix › Leptothrix cholodnii

Protein attributes

Sequence length	409 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Aminotransferase EMBL ACB34293.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1Y1J4 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 7628D69EDC4EF082	FASTA	409	45,511
	10 20 30 40 50 60 MLKTVAKSSK LANVCYDIRG PVLEKARQME EEGHKIIKLN IGNLAVFGLE PPDEIVQDMI 70 80 90 100 110 120 RNMPHAAGYT DSKGLFAPRK SVVHYTQEKG VKGVTVDDVY LGNGASELIA MSMNALLDDG 130 140 150 160 170 180 DEVLIPSPDY PLYTAVVALS GGKPVHYMCD EQAEWMPDIA DIRRKITPNT RAIVVINPNN 190 200 210 220 230 240 PTGALYPDSV LLELIEVARQ HQLIIFADEI YDKTLYDGHT HTSIAALADD VLILTFNGLS 250 260 270 280 290 300 KNYRSCGYRA GWMVVSGDKR HARDYIEGLN MLASMRLCAN TPGQLAIQTA LGGYQSIKDL 310 320 330 340 350 360 VVPTGRLCRQ RDLAHKLLSE IPGVTCVKPK AALYMFPRLD PKMYPIADDQ QFAYELLAEE 370 380 390 400 KVLIVQGTGF NWPTPDHFRL VFLPNSDDLT DAVSRIARFL DHYRKRHSA

References

[1]

"Complete sequence of Leptothrix cholodnii SP-6." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Lykidis A., Emerson D., Richardson P. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51168 / LMG 8142 / SP-6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001013 Genomic DNA. Translation: ACB34293.1.
RefSeq	YP_001791058.1. NC_010524.1.
3D structure databases
ProteinModelPortal	B1Y1J4.
ModBase	Search...
Protein-protein interaction databases
STRING	395495.Lcho_2026.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACB34293; ACB34293; Lcho_2026.
GeneID	6163575.
KEGG	lch:Lcho_2026.
PATRIC	22394411. VBILepCho83238_2042.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0436.
HOGENOM	HOG000223042.
KO	K14260.
OMA	YQARDMR.
ProtClustDB	PRK09265.
Enzyme and pathway databases
BioCyc	LCHO395495:GHYL-2060-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR004839. Aminotransferase_I/II. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00155. Aminotran_1_2. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
ProtoNet	Search...

Entry information

Entry name

B1Y1J4_LEPCP

Accession

Primary (citable) accession number: B1Y1J4

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	May 1, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)