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B1Y143 (B1Y143_LEPCP) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
L-ribulose-5-phosphate 4-epimerase EMBL ACB35460.1
EC=5.1.3.4 EMBL ACB35460.1
Gene names
Ordered Locus Names:Lcho_3202
OrganismLeptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6)) [Complete proteome] [HAMAP] EMBL ACB35460.1
Taxonomic identifier395495 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Leptothrix

Protein attributes

Sequence length244 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionIsomerase EMBL ACB35460.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionL-ribulose-phosphate 4-epimerase activity

Inferred from electronic annotation. Source: EC

metal ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1Y143 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: E482A49BDAAE0C22

FASTA24427,054
        10         20         30         40         50         60 
MNAAHPDLAH SLRQLRERVL EANLALPRHG LVTFTWGNVS GYDPELELVA IKPSGVSYER 

        70         80         90        100        110        120 
MALADIVVLD LQGRVVEGEL KPSSDTPTHL HLYRTWPQLR GIVHTHSTHA TSWAQAGRAI 

       130        140        150        160        170        180 
PAMGTTHADY FHGEVPCTRA LSREEVEGDY ELNTGHVIVE TVSALHDGNP LARPGILVAE 

       190        200        210        220        230        240 
HAPFAWGTSP DQAVHNAVVM EEVARMALYT HMLNPQRGPI EQHLLDKHYL RKHGKNAYYG 


QSKS

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References

[1]"Complete sequence of Leptothrix cholodnii SP-6."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Lykidis A., Emerson D., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51168 / LMG 8142 / SP-6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001013 Genomic DNA. Translation: ACB35460.1.
RefSeqYP_001792225.1. NC_010524.1.

3D structure databases

ProteinModelPortalB1Y143.
SMRB1Y143. Positions 12-233.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1Y143.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6162327.
GenomeReviewsGene locus Lcho_3202 in contig CP001013_GR.
KEGGlch:Lcho_3202.
PATRIC22396813. VBILepCho83238_3230.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG541069.
OMAIDSYLMN.

Family and domain databases

InterProIPR001303. Aldolase_II/adducin_N.
[Graphical view]
Gene3DG3DSA:3.40.225.10. Aldolase_II/adducin_N. 1 hit.
KOK03077.
PfamPF00596. Aldolase_II. 1 hit.
[Graphical view]
SMARTSM01007. Aldolase_II. 1 hit.
[Graphical view]
SUPFAMSSF53639. Aldolase_II_N. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1Y143_LEPCP
AccessionPrimary (citable) accession number: B1Y143
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: January 25, 2012
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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