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B1Y0P9

- GLGA_LEPCP

UniProt

B1Y0P9 - GLGA_LEPCP

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Protein

Glycogen synthase

Gene

glgA

Organism
Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6))
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciLCHO395495:GHYL-1917-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:Lcho_1890
OrganismiLeptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6))
Taxonomic identifieri395495 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesLeptothrix
ProteomesiUP000001693: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 487487Glycogen synthasePRO_1000126085Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi395495.Lcho_1890.

Structurei

3D structure databases

ProteinModelPortaliB1Y0P9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiHEMVQNC.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

B1Y0P9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRILQACAEI FPLLKTGGLA DVAGALPPAL RALGAEVRVV VPGFPAILAG
60 70 80 90 100
LVDAIEVARL EPPPAMVMAR GARLLYGRLP ACDVDAYVIN SPDHYHRDGG
110 120 130 140 150
PYNDARQHPY DDNHLRFGLL GWVAAKLADG LDPYWAPRVV HAHDWHAALA
160 170 180 190 200
PAYLRALEWA RGRRLAGSVY TVHNLAYQGF FPAHHFGDLG LPAAYNQVHG
210 220 230 240 250
LEFYGQISFM KGGLYFADRI TTVSPTYARE IQGAEQGCGL DGLLRDRDAD
260 270 280 290 300
LSGILNGVDD AVWNPAGDAL IPATYTRRKL TGKAQCKATL QAELGLAEDP
310 320 330 340 350
AVPLLCVVSR LTEQKGLHLV LQALPALIER GFQFALLGSG DAGMENEFRR
360 370 380 390 400
LAEQHPTAAA VRLGYDEAFA HRLIAGSDLI LVPSRFEPCG LTQLYGLKYG
410 420 430 440 450
TLPVVRRVGG LVDTVADARL ETLDHDATGF VFDDFSADGL IGACLRAKAL
460 470 480
FRRRADWLQV QRRGMQQPFG WEDSARQYLK LYQQVAA
Length:487
Mass (Da):53,120
Last modified:May 20, 2008 - v1
Checksum:i36BF73B11A7D2D5E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001013 Genomic DNA. Translation: ACB34157.1.
RefSeqiYP_001790922.1. NC_010524.1.

Genome annotation databases

EnsemblBacteriaiACB34157; ACB34157; Lcho_1890.
GeneIDi6159917.
KEGGilch:Lcho_1890.
PATRICi22394121. VBILepCho83238_1904.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001013 Genomic DNA. Translation: ACB34157.1 .
RefSeqi YP_001790922.1. NC_010524.1.

3D structure databases

ProteinModelPortali B1Y0P9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 395495.Lcho_1890.

Protein family/group databases

CAZyi GT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACB34157 ; ACB34157 ; Lcho_1890 .
GeneIDi 6159917.
KEGGi lch:Lcho_1890.
PATRICi 22394121. VBILepCho83238_1904.

Phylogenomic databases

eggNOGi COG0297.
HOGENOMi HOG000294941.
KOi K00703.
OMAi HEMVQNC.
OrthoDBi EOG6JTC6Z.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci LCHO395495:GHYL-1917-MONOMER.

Family and domain databases

HAMAPi MF_00484. Glycogen_synth.
InterProi IPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view ]
Pfami PF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02095. glgA. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51168 / LMG 8142 / SP-6.

Entry informationi

Entry nameiGLGA_LEPCP
AccessioniPrimary (citable) accession number: B1Y0P9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: May 20, 2008
Last modified: October 1, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3