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B1XZD9 (B1XZD9_LEPCP) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Phosphatidylserine decarboxylase proenzyme HAMAP MF_00662
EC=4.1.1.65 HAMAP MF_00662
Gene names
Name:psd HAMAP MF_00662
Ordered Locus Names:Lcho_4251
OrganismLeptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6)) [Complete proteome] [HAMAP] EMBL ACB36502.1
Taxonomic identifier395495 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Leptothrix

Protein attributes

Sequence length285 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Phosphatidyl-L-serine = phosphatidylethanolamine + CO2. HAMAP MF_00662 SAAS SAAS003817

Cofactor

Pyruvoyl group By similarity. HAMAP MF_00662 SAAS SAAS003817

Pathway

Phospholipid metabolism; phosphatidylethanolamine biosynthesis; phosphatidylethanolamine from CDP-diacylglycerol: step 2/2. HAMAP MF_00662 SAAS SAAS003817

Sequence similarities

Belongs to the phosphatidylserine decarboxylase family. Type 1 subfamily. HAMAP MF_00662

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Site250 – 2512Cleavage (non-hydrolytic) By similarity HAMAP MF_00662

Amino acid modifications

Modified residue2511Pyruvic acid (Ser) By similarity HAMAP MF_00662

Sequences

Sequence LengthMass (Da)Tools
B1XZD9 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: EC9692FFACF0F1FF

FASTA28530,824
        10         20         30         40         50         60 
MPALSDRLAV LPQYLLPKQA LTALAGRVAS AQAGAVTTGI IRRFVRRYGV DMSEAAEPDI 

        70         80         90        100        110        120 
ARYTSFNAFF TRALRPGVRP LANADLICPV DGAISQLGAI EGDQIFQAKG HRYSSTALLG 

       130        140        150        160        170        180 
GDAVLAAQYT NGHFATIYLS PRDYHRIHMP CDGRLLRMIH VPGALFSVNP TTARGVPGLF 

       190        200        210        220        230        240 
ARNERVVCIF DGPTGPFALV LVGATIVGSM ATAWHGVVNP PRPGQLREWN YEREDIRLAQ 

       250        260        270        280 
GDEMGRFLLG STVVMLFPAG PLTFNPQWTA ARPVRLGEAM ADGLR

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References

[1]"Complete sequence of Leptothrix cholodnii SP-6."
Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. expand/collapse author list , Kyrpides N., Lykidis A., Emerson D., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51168 / LMG 8142 / SP-6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001013 Genomic DNA. Translation: ACB36502.1.
RefSeqYP_001793267.1. NC_010524.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGB1XZD9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6163647.
GenomeReviewsGene locus Lcho_4251 in contig CP001013_GR.
KEGGlch:Lcho_4251.
PATRIC22398961. VBILepCho83238_4294.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG302256.
OMASMATVWH.
ProtClustDBPRK00044.

Family and domain databases

HAMAPMF_00662. PS_decarb_type1.
[Tree]
InterProIPR003817. PS_Dcarbxylase.
IPR005221. PS_decarb.
[Graphical view]
KOK01613.
PANTHERPTHR10067. PS_decarb. 1 hit.
PfamPF02666. PS_Dcarbxylase. 1 hit.
[Graphical view]
TIGRFAMsTIGR00163. PS_decarb. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1XZD9_LEPCP
AccessionPrimary (citable) accession number: B1XZD9
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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