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Protein
Submitted name:

NUDIX hydrolase

Gene

Lcho_0544

Organism
Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseUniRule annotationSAAS annotationImported

Enzyme and pathway databases

BioCyciLCHO395495:GHYL-549-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
NUDIX hydrolaseImported
Gene namesi
Ordered Locus Names:Lcho_0544Imported
OrganismiLeptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6))Imported
Taxonomic identifieri395495 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesLeptothrix
Proteomesi
  • UP000001693 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi395495.Lcho_0544.

Structurei

3D structure databases

ProteinModelPortaliB1XYT5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini19 – 148130Nudix hydrolaseInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the Nudix hydrolase family.UniRule annotation
Contains nudix hydrolase domain.SAAS annotation

Phylogenomic databases

eggNOGiENOG4105M6F. Bacteria.
COG0494. LUCA.
HOGENOMiHOG000261967.
KOiK03574.
OMAiASERWHT.
OrthoDBiPOG091H067L.

Family and domain databases

Gene3Di3.90.79.10. 1 hit.
InterProiIPR020476. Nudix_hydrolase.
IPR020084. NUDIX_hydrolase_CS.
IPR000086. NUDIX_hydrolase_dom.
IPR015797. NUDIX_hydrolase_dom-like.
[Graphical view]
PfamiPF00293. NUDIX. 1 hit.
[Graphical view]
PRINTSiPR00502. NUDIXFAMILY.
SUPFAMiSSF55811. SSF55811. 1 hit.
PROSITEiPS51462. NUDIX. 1 hit.
PS00893. NUDIX_BOX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1XYT5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEPTLVVPG AEGLATRRPV DVAVGVLIER DAAGVEGRFL LTSRPADKVY
60 70 80 90 100
AGYWEFPGGK LEAGETVGEA LRRELHEELG ITIGAVQPWQ QIEVDYPHAR
110 120 130 140 150
VRLHFCKVYA WQGEFEMREQ QSMAWQTLPV AVVPVLPGTV PVLRWLADER
160
GHVGPTHADS PAEVPA
Length:166
Mass (Da):18,226
Last modified:May 20, 2008 - v1
Checksum:iAA054DF9F28CFEC4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001013 Genomic DNA. Translation: ACB32819.1.
RefSeqiWP_012345581.1. NC_010524.1.

Genome annotation databases

EnsemblBacteriaiACB32819; ACB32819; Lcho_0544.
KEGGilch:Lcho_0544.
PATRICi22391373. VBILepCho83238_0551.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001013 Genomic DNA. Translation: ACB32819.1.
RefSeqiWP_012345581.1. NC_010524.1.

3D structure databases

ProteinModelPortaliB1XYT5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi395495.Lcho_0544.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACB32819; ACB32819; Lcho_0544.
KEGGilch:Lcho_0544.
PATRICi22391373. VBILepCho83238_0551.

Phylogenomic databases

eggNOGiENOG4105M6F. Bacteria.
COG0494. LUCA.
HOGENOMiHOG000261967.
KOiK03574.
OMAiASERWHT.
OrthoDBiPOG091H067L.

Enzyme and pathway databases

BioCyciLCHO395495:GHYL-549-MONOMER.

Family and domain databases

Gene3Di3.90.79.10. 1 hit.
InterProiIPR020476. Nudix_hydrolase.
IPR020084. NUDIX_hydrolase_CS.
IPR000086. NUDIX_hydrolase_dom.
IPR015797. NUDIX_hydrolase_dom-like.
[Graphical view]
PfamiPF00293. NUDIX. 1 hit.
[Graphical view]
PRINTSiPR00502. NUDIXFAMILY.
SUPFAMiSSF55811. SSF55811. 1 hit.
PROSITEiPS51462. NUDIX. 1 hit.
PS00893. NUDIX_BOX. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB1XYT5_LEPCP
AccessioniPrimary (citable) accession number: B1XYT5
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: September 7, 2016
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.