B1XXN3 (B1XXN3_LEPCP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Tetratricopeptide TPR_4 EMBL ACB36352.1

Gene names

Ordered Locus Names:

Lcho_4100

Organism

Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6)) [Complete proteome] [HAMAP] EMBL ACB36352.1

Taxonomic identifier

395495 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Leptothrix

Protein attributes

Sequence length	1377 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro intracellular signal transduction Inferred from electronic annotation. Source: InterPro
Molecular function	binding Inferred from electronic annotation. Source: InterPro phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1XXN3 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 48980C34D63C55BE	FASTA	1,377	149,221
	10 20 30 40 50 60 MEQAWGKPPA PVILMIVREA AWLSCALSDG HGVGIHAQIR IADPAALQAG LAERDAAPAD 70 80 90 100 110 120 TAARQALGGR VWLELLPAPI RRFLHASPAR VLTLQLGADL AGLPWELAFD GTRHLDEKFA 130 140 150 160 170 180 LARQILRDED APTPPVRAAA PEQLRVLVLA RLDPAPAADA AARALIQGLR RLPGLHLTAL 190 200 210 220 230 240 DARELAGLAQ PALAALGLHD IVHCCGIEPR LLAGPQLLVW EPPPARPAAD ARAGPAGVDP 250 260 270 280 290 300 CATRLTMATL AWAQAQGTQL LVHPIAPAGF MPVFYGQLAS GQPLGEAARR ARIAAREQGD 310 320 330 340 350 360 ACWLAHLQGD AQLTLLRSAG RAPQPDHLRQ VTMLSCDMVD STRLMRHLGS EAYSEILLRY 370 380 390 400 410 420 HGACAAVVGQ HGGVADDPQG DDGVMCYFGF PQAAENAAVL ALRAGLELLR CMADAGIAVR 430 440 450 460 470 480 LGVATGQIVV RAGQPVGAAV HYAARLQAIA APATLLASEE TRRVAGERFE FRRLEQVPDM 490 500 510 520 530 540 KGFDRPEPVY RVLGESALHG TERFDARSRL SPFVGRDKEL ARLRAHWRHA SAGQCLAIYV 550 560 570 580 590 600 SGDAGIGKSR LVREFRRAET GRGQLTIEWR CAREQSSSAL YPVTDFLRRH LRLQAGDAAP 610 620 630 640 650 660 VQLARLAASS LTDLAIEPAT ALALAANLLS IETGERHAVL DGAPERLRQQ TLELLQKWLW 670 680 690 700 710 720 RIADSAPLCL IIEDVHWIDP TTSELLGRVT AERQDGGLML LMTGRPEPEH QWAAALAAEE 730 740 750 760 770 780 IALAGLSDEM SRAMVAAVCE GSRVDAAFVQ WLVERADGVP LFIEESARMA LDIGAEEGTP 790 800 810 820 830 840 QLRRASLQDA VPTTIHDLLM ARLDRMPLAK HVAQVASAIG REVARHLIEA VCAHERCPIA 850 860 870 880 890 900 VADLDEGLAL LVRAGLLIPK GSGPGSSFLF KHALVRDAAY GSMWGRDRKR LHAAIAHVIQ 910 920 930 940 950 960 DTLPQLAELQ PELLARHCAE AGMAAEALVQ WERAARRSAA RSAQREAITH LGHALAALEA 970 980 990 1000 1010 1020 LPAGLERDRI ELRLQLMRAG RLIATEGYGA DQVEAVYGRA LALCRQLDDP VAMAKALFGL 1030 1040 1050 1060 1070 1080 EGYHFMRADF GRARAISEQA AELARHSSDP MAALQSQWVA ANLLFHQGEL RPAVERMDSC 1090 1100 1110 1120 1130 1140 LAAYQTLEHR PNAVQDPGVM CLCYSSWALW QLGQPDQALQ RATRVVELAR RLNHPFSMAE 1150 1160 1170 1180 1190 1200 AFGFITVVQH FRGDHEAALH SVEQALRISE DGGFSVWLAH AQVMHGRLLA QGGEHERGVA 1210 1220 1230 1240 1250 1260 LMRSGYERWS ASGAVVTRPF YLAMQAEGLA LAGRPDEGLG LLDSARALIE QHHERYFEPE 1270 1280 1290 1300 1310 1320 VLRLTGELTR QLASRHGGLQ DDVAEAWFER ALASADEMQQ HGLALRCACS LAALWQSADA 1330 1340 1350 1360 1370 HARAGQLIER HLRLCTEGST TADLRRARAL LAAAQEHTRG TPWSSTTRRA FAPTITH

References

[1]

"Complete sequence of Leptothrix cholodnii SP-6." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Lykidis A., Emerson D., Richardson P. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51168 / LMG 8142 / SP-6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001013 Genomic DNA. Translation: ACB36352.1.
RefSeq	YP_001793117.1. NC_010524.1.
3D structure databases
ProteinModelPortal	B1XXN3.
ModBase	Search...
Protein-protein interaction databases
STRING	B1XXN3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6160058.
GenomeReviews	Gene locus Lcho_4100 in contig CP001013_GR.
KEGG	lch:Lcho_4100.
PATRIC	22398677. VBILepCho83238_4152.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	HATAARW.
Family and domain databases
InterPro	IPR001054. A/G_cyclase. IPR011990. TPR-like_helical. [Graphical view]
Gene3D	G3DSA:3.30.70.1230. A/G_cyclase. 1 hit. G3DSA:1.25.40.10. TPR-like_helical. 1 hit.
Pfam	PF00211. Guanylate_cyc. 1 hit. [Graphical view]
SMART	SM00044. CYCc. 1 hit. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit.
PROSITE	PS50125. GUANYLATE_CYCLASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1XXN3_LEPCP

Accession

Primary (citable) accession number: B1XXN3

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)