B1XXE5 (B1XXE5_LEPCP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Nuclease (SNase domain protein) EMBL ACB35065.1

Gene names

Ordered Locus Names:

Lcho_2800

Organism

Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6)) [Complete proteome] [HAMAP] EMBL ACB35065.1

Taxonomic identifier

395495 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Leptothrix

Protein attributes

Sequence length	194 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ACB35065.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	nuclease activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 30	30	Potential EMBL ACB35065.1
	Chain	31 – 194	164	Potential EMBL ACB35065.1		PRO_5000331227

Sequences

	Sequence		Length	Mass (Da)
	B1XXE5 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 3D16F9DDAF6F47F8	FASTA	194	21,878
	10 20 30 40 50 60 MQTGIRVRRR VRWALIGAGL LACLSGACAW TVVGEVTRVS DGDTVTLLDR ERRRHKIRLA 70 80 90 100 110 120 GIDAPERQQA WGKVAASALR LALLRRTASA ECDSVDRYGR AVCTLTLDQQ DVSLAMLNAG 130 140 150 160 170 180 LAWHYVAYIR DQTRAEARRY AAAEQDARQA RRGLWAEHDP TPPWEWRRAM KDRTKARADS 190 QGSKPRRQAI ESML

References

[1]

"Complete sequence of Leptothrix cholodnii SP-6." Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. , Kyrpides N., Lykidis A., Emerson D., Richardson P. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51168 / LMG 8142 / SP-6.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001013 Genomic DNA. Translation: ACB35065.1.
RefSeq	YP_001791830.1. NC_010524.1.
3D structure databases
ProteinModelPortal	B1XXE5.
ModBase	Search...
Protein-protein interaction databases
STRING	B1XXE5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6161926.
GenomeReviews	Gene locus Lcho_2800 in contig CP001013_GR.
KEGG	lch:Lcho_2800.
PATRIC	22396007. VBILepCho83238_2830.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG752546.
OMA	IEPYKWR.
Family and domain databases
InterPro	IPR016071. Staphylococal_nuclease_OB-fold. IPR006021. Staphylococcal_nuclease. IPR002071. Thermonucl_AS. [Graphical view]
Gene3D	G3DSA:2.40.50.90. SNase. 1 hit.
Pfam	PF00565. SNase. 1 hit. [Graphical view]
SMART	SM00318. SNc. 1 hit. [Graphical view]
SUPFAM	SSF50199. Staphylococal_nuclease_OB-fold. 1 hit.
PROSITE	PS01123. TNASE_1. 1 hit. PS50830. TNASE_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1XXE5_LEPCP

Accession

Primary (citable) accession number: B1XXE5

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)