B1XVL5 (B1XVL5_POLNS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
N-acetylmuramoyl-L-alanine amidase EMBL ACB44392.1
EC=3.5.1.28 EMBL ACB44392.1

Gene names

Ordered Locus Names:

Pnec_1262

Organism

Polynucleobacter necessarius (strain STIR1) [Complete proteome] [HAMAP]

Taxonomic identifier

452638 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Polynucleobacter

Protein attributes

Sequence length	452 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ACB44392.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	N-acetylmuramoyl-L-alanine amidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	B1XVL5 [UniParc]. Last modified May 20, 2008. Version 1. Checksum: 48DB3FB955C8EB85	FASTA	452	50,024
	10 20 30 40 50 60 MDTKKIKSKI NHSKRQTLKT SAKFLSFALL LTELDIAWGA KILGVRVWPS EDYTRVTLES 70 80 90 100 110 120 DTPLPITQQI LINPDRLVVD VQGLELNPTL KDLVAKVKPN DPYISQVRVG QFQPGIVRLV 130 140 150 160 170 180 FDLKEPIKPQ LFTLDPVAEY NYRMVFDLYP TTPPDPLMAL VRSSAKKESA LEKSNEEVDL 190 200 210 220 230 240 IAQFATKKEK EFAKTPAAPV AQAIPEPKEL PAPAKYKRLI TIAIDPGHGG EDPGAIGAAG 250 260 270 280 290 300 SREKNVVLAI AKRLKDKIEG EAYMRPFLTR DGDYFVPLHV RVQKARRVEA DLFVSIHADA 310 320 330 340 350 360 FIERNAKGAS VFALSQMGAS STTARWMANK ENASDLIGGI NIKTQDRQVA NLLLDMSTTA 370 380 390 400 410 420 QIKDSLQVGN SILRQIGGFA PLHKPKVEQA SFAVLKAPDI PSILVETAFI SNPQEEARLN 430 440 450 DDGYQDRIAE AILRGIKEYF SKNPPVARRV NS

References

[1]

"Complete sequence of Polynucleobacter necessarius STIR1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Kim E., Hahn M., Richardson P. Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: STIR1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001010 Genomic DNA. Translation: ACB44392.1.
RefSeq	YP_001798006.1. NC_010531.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	B1XVL5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6183472.
GenomeReviews	Gene locus Pnec_1262 in contig CP001010_GR.
KEGG	pne:Pnec_1262.
PATRIC	22971706. VBIPolNec8289_1454.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG656726.
OMA	VWPAEDY.
ProtClustDB	CLSK2323643.
Family and domain databases
InterPro	IPR021731. AMIN. IPR002508. CW_Hdrlase/autolysin_cat. [Graphical view]
Gene3D	G3DSA:3.40.630.40. Cell_wall_OHase/autolysin_cat. 2 hits.
KO	K01448.
Pfam	PF01520. Amidase_3. 1 hit. PF11741. AMIN. 1 hit. [Graphical view]
SMART	SM00646. Ami_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

B1XVL5_POLNS

Accession

Primary (citable) accession number: B1XVL5

Entry history

Integrated into UniProtKB/TrEMBL:	May 20, 2008
Last sequence update:	May 20, 2008
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)