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B1XVJ4 (B1XVJ4_POLNS) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Permease YjgP/YjgQ family protein EMBL ACB44371.1
Gene names
Ordered Locus Names:Pnec_1235
OrganismPolynucleobacter necessarius subsp. necessarius (strain STIR1) [Complete proteome] [HAMAP] EMBL ACB44371.1
Taxonomic identifier452638 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Polynucleobacter ›

Protein attributes

Sequence length386 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
B1XVJ4 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 98F32158FA2131BD

FASTA38643,280
        10         20         30         40         50         60 
MKLLFPFIYE RYLAKQIYAA FGFILFALVA LFLFFDILSE LGLVQGTYTL PLALLHALLK 

        70         80         90        100        110        120 
APSRISEIIP IAGLIGSIYV FAMLASQSEF TILRIAGLDV KRGLIALTKI SIPLIALTLI 

       130        140        150        160        170        180 
MSEWIGPYTE AKSDQIRMKA MGSAYSSQFR TGVWVKDRLR DEDGSGPVRP GVRYVNVGKV 

       190        200        210        220        230        240 
DKDNEIRNIR MYEFDDTYHL LSIRSAVSGQ FDETGVWVLN DVTETRFKET KQSDPLNPVF 

       250        260        270        280        290        300 
SAQTFTRPIV TLESEVTPQI LSVLLISPEK MSIMSLGRFI SHLRENKQDA HRHSIAFWKK 

       310        320        330        340        350        360 
VVYPFTIFVM LTLALPFAYL KVRAGSVGIK VFGGIMLGMS FQLFNSLFSN VGLLGSWPAL 

       370        380 
ITALTPPLLY FLLALAGLRW VSKLNT

« Hide

References

[1]"Complete sequence of Polynucleobacter necessarius STIR1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Hahn M., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: STIR1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001010 Genomic DNA. Translation: ACB44371.1.
RefSeqYP_001797985.1. NC_010531.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING452638.Pnec_1235.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB44371; ACB44371; Pnec_1235.
GeneID6183655.
KEGGpne:Pnec_1235.
PATRIC22971635. VBIPolNec8289_1420.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0795.
HOGENOMHOG000263593.
KOK11720.
OMAVGDYIAP.
ProtClustDBCLSK897322.

Enzyme and pathway databases

BioCycPNEC452638:GI4T-1240-MONOMER.

Family and domain databases

InterProIPR005495. YjgP_YjgQ_permease_prd.
[Graphical view]
PfamPF03739. YjgP_YjgQ. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1XVJ4_POLNS
AccessionPrimary (citable) accession number: B1XVJ4
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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