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B1XUQ5 (B1XUQ5_POLNS) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length211 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis By similarity. HAMAP-Rule MF_00165

Catalytic activity

ATP + dTMP = ADP + dTDP. HAMAP-Rule MF_00165 SAAS SAAS018094

Sequence similarities

Belongs to the thymidylate kinase family. HAMAP-Rule MF_00165

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding13 – 208ATP By similarity HAMAP-Rule MF_00165

Sequences

Sequence LengthMass (Da)Tools
B1XUQ5 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: F014E7F281B660F6

FASTA21123,840
        10         20         30         40         50         60 
MTSHTGYFIS FEGIDGAGKS THIDAFRNLI QERYPNIEVV MTREPGGTVL GEQLRNLLLD 

        70         80         90        100        110        120 
TPMNLETEAL LMFAARREHL SQVIKPALTA GKIIISDRFT DASFAYQGGG RGLSLAKLND 

       130        140        150        160        170        180 
LERWVQGQPD GSILQPNLTI LFDLPGDIAE ARRSKVHTPD KFEKMDLSFF ERVRQEYLRR 

       190        200        210 
AKDDPDRFHL VDATQTPEAI WNGLKLIQID L

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References

[1]"Complete sequence of Polynucleobacter necessarius STIR1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Hahn M., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: STIR1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001010 Genomic DNA. Translation: ACB44082.1.
RefSeqYP_001797696.1. NC_010531.1.

3D structure databases

ProteinModelPortalB1XUQ5.
ModBaseSearch...

Protein-protein interaction databases

STRING452638.Pnec_0883.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACB44082; ACB44082; Pnec_0883.
GeneID6184410.
KEGGpne:Pnec_0883.
PATRIC22970822. VBIPolNec8289_1025.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0125.
HOGENOMHOG000229078.
KOK00943.
OMAITLEGPE.
ProtClustDBCLSK2323786.

Enzyme and pathway databases

BioCycPNEC452638:GI4T-891-MONOMER.

Family and domain databases

HAMAPMF_00165. Thymidylate_kinase.
InterProIPR018094. Thymidylate_kinase.
[Graphical view]
PANTHERPTHR10344. PTHR10344. 1 hit.
TIGRFAMsTIGR00041. DTMP_kinase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1XUQ5_POLNS
AccessionPrimary (citable) accession number: B1XUQ5
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: May 1, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info