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B1XU29 (B1XU29_POLNS) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Selenide, water dikinase HAMAP MF_00625
EC=2.7.9.3 HAMAP MF_00625
Alternative name(s):
Selenium donor protein HAMAP MF_00625
Selenophosphate synthase HAMAP MF_00625
Gene names
Name:selD HAMAP MF_00625
Ordered Locus Names:Pnec_0606
OrganismPolynucleobacter necessarius (strain STIR1) [Complete proteome] [HAMAP]
Taxonomic identifier452638 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Polynucleobacter

Protein attributes

Sequence length353 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes selenophosphate from selenide and ATP By similarity. HAMAP MF_00625 SAAS SAAS023061

Catalytic activity

ATP + selenide + H2O = AMP + selenophosphate + phosphate. HAMAP MF_00625 SAAS SAAS023061

Cofactor

Magnesium By similarity. HAMAP MF_00625 SAAS SAAS023061

Sequence similarities

Belongs to the selenophosphate synthase 1 family. Class I subfamily. HAMAP MF_00625

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding234 – 2407ATP By similarity HAMAP MF_00625

Sites

Active site211 By similarity HAMAP MF_00625
Site241Important for catalytic activity By similarity HAMAP MF_00625

Sequences

Sequence LengthMass (Da)Tools
B1XU29 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 64589F8C946DC6FE

FASTA35336,973
        10         20         30         40         50         60 
MNTLNLSTEP RLTSLSHGGG CGCKIAPGVL SEILKNVPQL PFPKELLIGI ETSDDAAVYQ 

        70         80         90        100        110        120 
INESQAIVAT TDFFMPIVDD PFDFGKIAAT NAISDIYAMG GTPLFALALV GMPIKVLSNK 

       130        140        150        160        170        180 
TIARILKGGA EACRSAGIPI AGGHTIDSVE PIYGLVAIGI VDPKRVKSNA SAKPGDVLIL 

       190        200        210        220        230        240 
GKPLGVGVLS AALKKDLLGP DGYREMIANT TKLNSAGPDL AKLSGVHALT DVTGFGLAGH 

       250        260        270        280        290        300 
TLELARGSNC TAHIDWNQVP LLSNVQALTN DGMITGASDR NWLSYGNEVN IPADFTPAQR 

       310        320        330        340        350 
ALLTDPQTSG GLLVSCSSDS VKEVLDIFNQ HHFLGARVIG QMSKRQEKPL VVS

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References

[1]"Complete sequence of Polynucleobacter necessarius STIR1."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Hahn M., Richardson P.
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: STIR1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001010 Genomic DNA. Translation: ACB43856.1.
RefSeqYP_001797470.1. NC_010531.1.

3D structure databases

ProteinModelPortalB1XU29.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1XU29.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6183830.
GenomeReviewsGene locus Pnec_0606 in contig CP001010_GR.
KEGGpne:Pnec_0606.
PATRIC22970153. VBIPolNec8289_0701.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG383791.
OMAMMAIAIL.
ProtClustDBCLSK2323882.

Family and domain databases

HAMAPMF_00625. SelD.
[Tree]
InterProIPR000728. AIR_synth.
IPR010918. AIR_synth_C.
IPR016188. PurM_N-like.
IPR004536. SelD.
IPR023061. SelD_I.
[Graphical view]
KOK01008.
PfamPF00586. AIRS. 1 hit.
PF02769. AIRS_C. 1 hit.
[Graphical view]
PIRSFPIRSF036407. Selenphspht_syn. 1 hit.
SUPFAMSSF56042. AIR_synth_C. 1 hit.
SSF55326. PurM_N-like. 1 hit.
TIGRFAMsTIGR00476. SelD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameB1XU29_POLNS
AccessionPrimary (citable) accession number: B1XU29
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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