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Protein
Submitted name:

Sensory box/GGDEF family protein

Gene

SYNPCC7002_A1859

Organism
Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciSSP32049:GKF7-1860-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Sensory box/GGDEF family proteinImported
Gene namesi
Ordered Locus Names:SYNPCC7002_A1859Imported
OrganismiSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)Imported
Taxonomic identifieri32049 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
Proteomesi
  • UP000001688 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei29 – 5224HelicalSequence analysisAdd
BLAST
Transmembranei64 – 8522HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi32049.SYNPCC7002_A1859.

Structurei

3D structure databases

ProteinModelPortaliB1XQ65.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini171 – 304134GGDEFInterPro annotationAdd
BLAST
Domaini313 – 567255EALInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105BZU. Bacteria.
COG2199. LUCA.
COG2200. LUCA.
HOGENOMiHOG000136246.
OMAiSPYWRLA.
OrthoDBiPOG091H049G.

Family and domain databases

CDDicd01948. EAL. 1 hit.
cd01949. GGDEF. 1 hit.
Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1XQ65-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNQYKMKQE KHQLNWYANI SRLSRPKSYL GKIMLVAFLG THIPLLTLFF
60 70 80 90 100
YSISVTTLST DTKIRVLVVA LLATLIGTAV TLFTLQKLLL PISVTAKGLR
110 120 130 140 150
KYLENNQIPK LPTHFQDEVG VLMADTLYTI SKLDELIEQL KNYDHTTSLP
160 170 180 190 200
NLHLFQALLQ KEIYNAQCRN QSLAVLFLDL DNFTNINTHL GRDYGNLILR
210 220 230 240 250
TIAQQLTQAI GDNDLLAKIN TDTFAIIYPH LISLEDLEKY SQKLLTIINQ
260 270 280 290 300
KVTVKHEDIY LSATMGITVY DEGKVEPQEI INQAETALNL AKEEGRNIYR
310 320 330 340 350
FYSVETNEKL RSRFQLERDL YRALEREELE LFYQPQIDVK TGNITGAEAL
360 370 380 390 400
LRWRHHEHGF ISPGIFIPIA EASDLIINIS DWVLKTACYQ NQQWTKDGFP
410 420 430 440 450
ELCVAVNLSG KQFQQPQLVD DVSKILKETS LKPSQLELEI TEGLLINNIQ
460 470 480 490 500
NAVKTLEDLH NLGLITALDD FGTGFSSLSY LKRFSLDYLK IDQSFVRGIP
510 520 530 540 550
LDKDDVAITN SIIALAHSLQ IEVIAEGVET IEQVNYLKSV GCNKLQGYYY
560 570
SRPICAKDFA ELWEQNLEKG
Length:570
Mass (Da):64,967
Last modified:May 20, 2008 - v1
Checksum:iDE2F3CD62CC28945
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000951 Genomic DNA. Translation: ACA99847.1.
RefSeqiWP_012307470.1. NC_010475.1.

Genome annotation databases

EnsemblBacteriaiACA99847; ACA99847; SYNPCC7002_A1859.
KEGGisyp:SYNPCC7002_A1859.
PATRICi23818356. VBISynSp37135_2119.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000951 Genomic DNA. Translation: ACA99847.1.
RefSeqiWP_012307470.1. NC_010475.1.

3D structure databases

ProteinModelPortaliB1XQ65.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi32049.SYNPCC7002_A1859.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACA99847; ACA99847; SYNPCC7002_A1859.
KEGGisyp:SYNPCC7002_A1859.
PATRICi23818356. VBISynSp37135_2119.

Phylogenomic databases

eggNOGiENOG4105BZU. Bacteria.
COG2199. LUCA.
COG2200. LUCA.
HOGENOMiHOG000136246.
OMAiSPYWRLA.
OrthoDBiPOG091H049G.

Enzyme and pathway databases

BioCyciSSP32049:GKF7-1860-MONOMER.

Family and domain databases

CDDicd01948. EAL. 1 hit.
cd01949. GGDEF. 1 hit.
Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiB1XQ65_SYNP2
AccessioniPrimary (citable) accession number: B1XQ65
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: September 7, 2016
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.