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B1XQ14 (B1XQ14_SYNP2) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Biosynthetic arginine decarboxylase HAMAP MF_01417
Short name=ADC HAMAP MF_01417
EC=4.1.1.19 HAMAP MF_01417
Gene names
Name:speA HAMAP MF_01417 EMBL ACA99796.1
Ordered Locus Names:SYNPCC7002_A1808
OrganismSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum) [Complete proteome] [HAMAP]
Taxonomic identifier32049 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length644 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the biosynthesis of agmatine from arginine By similarity. HAMAP MF_01417 SAAS SAAS009006

Catalytic activity

L-arginine = agmatine + CO2. HAMAP MF_01417 SAAS SAAS009006 RuleBase RU003740

Cofactor

Magnesium By similarity. HAMAP MF_01417 RuleBase RU003740 SAAS SAAS009006

Pyridoxal phosphate By similarity. HAMAP MF_01417 SAAS SAAS000183

Pathway

Amine and polyamine biosynthesis; agmatine biosynthesis; agmatine from L-arginine: step 1/1. HAMAP MF_01417

Sequence similarities

Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. HAMAP MF_01417

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region297 – 30711Substrate-binding By similarity HAMAP MF_01417

Amino acid modifications

Modified residue1121N6-(pyridoxal phosphate)lysine By similarity HAMAP MF_01417

Sequences

Sequence LengthMass (Da)Tools
B1XQ14 [UniParc].

Last modified May 20, 2008. Version 1.
Checksum: 93A29A72B8706D86

FASTA64472,719
        10         20         30         40         50         60 
MNKALGCLEQ SVNTRWTVAD SETLYQVAGW GEPYFSINNQ GHVQVSPLGD AGTSIDLFEL 

        70         80         90        100        110        120 
VESLKQRNIG LPFLIRFPDI LRDRIERLQD CFATAIARYD YPNHYRGVYP VKCNQQRHLV 

       130        140        150        160        170        180 
EDLVELGRTH HLGLEAGSKP ELMIAIALLE PEADQERLLI CNGYKDQHYI ETALLATQLG 

       190        200        210        220        230        240 
HRALIVIEQP EELDLVIRAS QSLGIRPMLG IRAKLASRGI GRWGGSSGDR AKFGLTIPQI 

       250        260        270        280        290        300 
LRLVEKLQAE EMLDCLQLLH YHIGSQLSSI SVVKSAIREA SQIYVELVKL GAPMGFLDVG 

       310        320        330        340        350        360 
GGLAVDYSGS KNNFPSSKNY NMQNYANDVV ATVQDTCDET NVPVPVLVSE SGRAIASHQA 

       370        380        390        400        410        420 
VLIFDVLGSS EVDPILPPKP DYKEHLVLRN LRETYDTITP ENYQENYHDA VQFKDEAISL 

       430        440        450        460        470        480 
FNLGYLSLGD RANAEELYWS CCQKIFSIIQ GQASIPEDFE ELWQNMAALY YVNLSVFQSV 

       490        500        510        520        530        540 
PDSWAIDQLF PIMPIHRLHE EPTKKGILAD LTCDSDGRIN RFIDTKAESK NLLELHPPNG 

       550        560        570        580        590        600 
QPYYLGLFLM GAYQEIMGNL HNLFGDTHVV HVRLTDDGYH LEHLVEGDTI KEVLQYVQYD 

       610        620        630        640 
VADLLETMRC RTEKALSEKR LTLQQSQLLI NHYRQSLESY TYLH

« Hide

References

[1]"Complete sequence of Synechococcus sp. PCC 7002."
Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A.
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000951 Genomic DNA. Translation: ACA99796.1.
RefSeqYP_001735052.1. NC_010475.1.

3D structure databases

ProteinModelPortalB1XQ14.
ModBaseSearch...

Protein-protein interaction databases

STRINGB1XQ14.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6056695.
GenomeReviewsGene locus SYNPCC7002_A1808 in contig CP000951_GR.
KEGGsyp:SYNPCC7002_A1808.
PATRIC23818248. VBISynSp37135_2065.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG321436.
OMALICNGYK.
PhylomeDBB1XQ14.
ProtClustDBPRK05354.

Family and domain databases

HAMAPMF_01417. SpeA.
[Tree]
InterProIPR009006. Ala_racemase/Decarboxylase_C.
IPR002985. Arg_decrbxlase.
IPR022643. De-COase2_C.
IPR022644. De-COase2_N.
IPR022653. De-COase2_pyr-phos_BS.
IPR000183. Orn/DAP/Arg_de-COase.
[Graphical view]
Gene3DG3DSA:2.40.37.10. Ala_racemase/Decarboxylase_C. 2 hits.
KOK01585.
PANTHERPTHR11482:SF3. Arg_decrbxlase. 1 hit.
PfamPF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]
PIRSFPIRSF001336. Arg_decrbxlase. 1 hit.
PRINTSPR01180. ARGDCRBXLASE.
PR01179. ODADCRBXLASE.
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR01273. SpeA. 1 hit.
PROSITEPS00878. ODR_DC_2_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameB1XQ14_SYNP2
AccessionPrimary (citable) accession number: B1XQ14
Entry history
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info