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B1XPX8

- SYR_SYNP2

UniProt

B1XPX8 - SYR_SYNP2

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Protein

Arginine--tRNA ligase

Gene

argS

Organism
Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

GO - Molecular functioni

  1. arginine-tRNA ligase activity Source: UniProtKB-HAMAP
  2. ATP binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. arginyl-tRNA aminoacylation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetase, Ligase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciSSP32049:GKF7-599-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
Alternative name(s):
Arginyl-tRNA synthetaseUniRule annotation
Short name:
ArgRSUniRule annotation
Gene namesi
Name:argSUniRule annotation
Ordered Locus Names:SYNPCC7002_A0599
OrganismiSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Taxonomic identifieri32049 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001688: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 585585Arginine--tRNA ligasePRO_1000095415Add
BLAST

Proteomic databases

PRIDEiB1XPX8.

PTM databases

PhosSiteiP13051882.

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi32049.SYNPCC7002_A0599.

Structurei

3D structure databases

ProteinModelPortaliB1XPX8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi126 – 13611"HIGH" regionAdd
BLAST

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0018.
HOGENOMiHOG000247212.
KOiK01887.
OMAiDWIIYVV.
OrthoDBiEOG6JB13C.

Family and domain databases

Gene3Di1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPiMF_00123. Arg_tRNA_synth.
InterProiIPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
PANTHERiPTHR11956. PTHR11956. 1 hit.
PfamiPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSiPR01038. TRNASYNTHARG.
SMARTiSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMiSSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsiTIGR00456. argS. 1 hit.
PROSITEiPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

B1XPX8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKSILSQLKT AVSEALIKAF GEDLKDTDPL VVPASNPKFG DYQSNVALSL
60 70 80 90 100
TKILKKNPRE IAQSIIEALD IADTCENPTI AGPGFINFSL KPSYLATLLK
110 120 130 140 150
EVQQSDRLAI EPAENPQKVI VDFSSPNIAK EMHVGHLRST IIGDSIARIL
160 170 180 190 200
EFRGQDVLRL NHVGDWGTQF GMLITYLKEV YPDALTKADA LDIGDLVAFY
210 220 230 240 250
KKAKVRFDED EAFKEASRNQ VVKLQSGDEE SQKAWQLLCE QSRREFQKIY
260 270 280 290 300
DILDIKLTER GESFYNPYLA DVLTALDEVG LLEEDAGAQC VFLEGFKNKD
310 320 330 340 350
GDRLPLIVQK SDGGFNYATT DLAAIRYRIK EDQAKRIIYV TDSGQAGHFA
360 370 380 390 400
QVFQVAERAG FLPDDVEVVH VPFGLVQGED GKKLKTRAGD TIKLKDLLDE
410 420 430 440 450
AVNRSRADLE KRLAEDERQE TADFIEKVSQ VVGIGAVKYA DLSQNRTSNY
460 470 480 490 500
IFSFDKMLAL QGNTAPYMLY AYVRVQGVSR QGGIDLSTLP TDTPIILEEA
510 520 530 540 550
AELTLAKHLL QLSEVLMSVE QDLMPNRLCE YLYDLSRKFN QFYEACPILK
560 570 580
AEGDRRISRL ILADTTARTL KLGLSLLGIE VLDRM
Length:585
Mass (Da):65,395
Last modified:May 20, 2008 - v1
Checksum:i923397CA1C6A63E7
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000951 Genomic DNA. Translation: ACA98606.1.
RefSeqiWP_012306230.1. NC_010475.1.
YP_001733862.1. NC_010475.1.

Genome annotation databases

EnsemblBacteriaiACA98606; ACA98606; SYNPCC7002_A0599.
GeneIDi6055596.
KEGGisyp:SYNPCC7002_A0599.
PATRICi23815668. VBISynSp37135_0794.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000951 Genomic DNA. Translation: ACA98606.1 .
RefSeqi WP_012306230.1. NC_010475.1.
YP_001733862.1. NC_010475.1.

3D structure databases

ProteinModelPortali B1XPX8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 32049.SYNPCC7002_A0599.

PTM databases

PhosSitei P13051882.

Proteomic databases

PRIDEi B1XPX8.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACA98606 ; ACA98606 ; SYNPCC7002_A0599 .
GeneIDi 6055596.
KEGGi syp:SYNPCC7002_A0599.
PATRICi 23815668. VBISynSp37135_0794.

Phylogenomic databases

eggNOGi COG0018.
HOGENOMi HOG000247212.
KOi K01887.
OMAi DWIIYVV.
OrthoDBi EOG6JB13C.

Enzyme and pathway databases

BioCyci SSP32049:GKF7-599-MONOMER.

Family and domain databases

Gene3Di 1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPi MF_00123. Arg_tRNA_synth.
InterProi IPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view ]
PANTHERi PTHR11956. PTHR11956. 1 hit.
Pfami PF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view ]
PRINTSi PR01038. TRNASYNTHARG.
SMARTi SM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view ]
SUPFAMi SSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsi TIGR00456. argS. 1 hit.
PROSITEi PS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Synechococcus sp. PCC 7002."
    Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A.
    Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27264 / PCC 7002 / PR-6.

Entry informationi

Entry nameiSYR_SYNP2
AccessioniPrimary (citable) accession number: B1XPX8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 24, 2009
Last sequence update: May 20, 2008
Last modified: October 29, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3