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Protein
Submitted name:

Sigma factor SibG regulation protein RsbU

Gene

SYNPCC7002_A0371

Organism
Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSSP32049:GKF7-371-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Sigma factor SibG regulation protein RsbUImported
Gene namesi
Ordered Locus Names:SYNPCC7002_A0371Imported
OrganismiSynechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum)Imported
Taxonomic identifieri32049 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001688: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi32049.SYNPCC7002_A0371.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2208.
HOGENOMiHOG000232401.
KOiK07315.
OMAiRPAFQVG.
OrthoDBiEOG6ZH2CT.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
3.60.40.10. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF13492. GAF_3. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.
SSF81606. SSF81606. 1 hit.

Sequencei

Sequence statusi: Complete.

B1XNK3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQLVSGKPDS RLETAIGEDV EFLRAQIAKL SREQTKVQDL LSSLGFALRS
60 70 80 90 100
FNNLNQFLEL TPLMSARVVD ADGGALVLFD AQGQVQLEKF YCGEGGDCQF
110 120 130 140 150
IRQAFTQLQT RAKTTNPEAA TCTAQEALQF DEKLQAQLGE EIRVCSTPIL
160 170 180 190 200
VKNVTRGKLY VFSRDPQYGW DITRRKLVQL VADQTAVAIA NNDLTSKLRS
210 220 230 240 250
KEKQDRELEI ASEIQNHLLP SECPQIKGLA IAADYRNAYR VGGDYYDFIP
260 270 280 290 300
SNYDRIRSQD DPKLVQCVPW SIVIGDVMGK GVPAGLIMTM TRGMLRAEVL
310 320 330 340 350
NRHSPAKILE HLNRVMYADL DNSHRFVTLF YSEYDPKTRT LSYSNAAHHP
360 370 380 390 400
PLLWRAQTQN IEPLDTQGML IGLDLDSSYE DAKVVLEVGD IILYYTDGFT
410 420 430 440 450
DAVNSHGDRF DEENLVRVFQ NACQNCQTPE AIVQELFTQV EKFTYPKVRG
460 470
GDDMTLVVVQ VQSEAIESHL CQHHDC
Length:476
Mass (Da):53,582
Last modified:May 20, 2008 - v1
Checksum:i30B22B271D2030DA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000951 Genomic DNA. Translation: ACA98381.1.
RefSeqiWP_012306005.1. NC_010475.1.
YP_001733637.1. NC_010475.1.

Genome annotation databases

EnsemblBacteriaiACA98381; ACA98381; SYNPCC7002_A0371.
GeneIDi6057169.
KEGGisyp:SYNPCC7002_A0371.
PATRICi23815190. VBISynSp37135_0558.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000951 Genomic DNA. Translation: ACA98381.1.
RefSeqiWP_012306005.1. NC_010475.1.
YP_001733637.1. NC_010475.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi32049.SYNPCC7002_A0371.

Protocols and materials databases

DNASUi6057169.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACA98381; ACA98381; SYNPCC7002_A0371.
GeneIDi6057169.
KEGGisyp:SYNPCC7002_A0371.
PATRICi23815190. VBISynSp37135_0558.

Phylogenomic databases

eggNOGiCOG2208.
HOGENOMiHOG000232401.
KOiK07315.
OMAiRPAFQVG.
OrthoDBiEOG6ZH2CT.

Enzyme and pathway databases

BioCyciSSP32049:GKF7-371-MONOMER.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
3.60.40.10. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF13492. GAF_3. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.
SSF81606. SSF81606. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of Synechococcus sp. PCC 7002."
    Li T., Zhao J., Zhao C., Liu Z., Zhao F., Marquardt J., Nomura C.T., Persson S., Detter J.C., Richardson P.M., Lanz C., Schuster S.C., Wang J., Li S., Huang X., Cai T., Yu Z., Luo J., Zhao J., Bryant D.A.
    Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27264 / PCC 7002 / PR-6Imported.

Entry informationi

Entry nameiB1XNK3_SYNP2
AccessioniPrimary (citable) accession number: B1XNK3
Entry historyi
Integrated into UniProtKB/TrEMBL: May 20, 2008
Last sequence update: May 20, 2008
Last modified: January 7, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.